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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS02745 and MMP_RS02750 are separated by 15 nucleotides
MMP_RS02750 and MMP_RS02755 are separated by 101 nucleotides
MMP_RS02755 and MMP_RS02760 are separated by 12 nucleotides
MMP_RS02760 and MMP_RS02765 are separated by 4 nucleotides
MMP_RS02745: MMP_RS02745 - hypothetical protein, at 523,566 to 523,943
_RS02745
MMP_RS02750: MMP_RS02750 - HAD-IC family P-type ATPase, at 523,959 to 526,463
_RS02750
MMP_RS02755: MMP_RS02755 - ABC transporter permease, at 526,565 to 527,812
_RS02755
MMP_RS02760: MMP_RS02760 - COG1361 S-layer family protein, at 527,825 to 529,141
_RS02760
MMP_RS02765: MMP_RS02765 - ABC transporter ATP-binding protein, at 529,146 to 529,850
_RS02765
Group
Condition
MMP
_RS02745
MMP
_RS02750
MMP
_RS02755
MMP
_RS02760
MMP
_RS02765
stress
Formate with Bacitracin 15.6 uM
-1.3
+0.1
-1.0
-0.5
-1.1
stress
McCas_H2_complete Benzethonium chloride 0.003125 mM
-1.5
-0.0
-0.4
-0.0
-1.0
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
-0.7
-0.2
-0.5
-0.6
-0.6
stress
McCas_H2_complete Fluorophosphate 62.5 mM
-1.1
-0.4
+0.0
-0.2
-0.8
no stress control
McCas_H2_complete no stress control
-0.7
-0.2
-0.2
+0.0
-1.1
stress
McCas_H2_complete Chloride 500 mM
-0.6
-0.4
-0.1
+0.1
-0.9
stress
McCas_H2_complete sulfate 125 mM
-1.3
+0.2
+0.1
+0.1
-0.9
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
-0.8
-0.4
-0.6
-0.3
+0.3
stress
McCas_H2_complete Spiramycin 0.1 mM
-0.9
+0.0
+0.1
-0.5
-0.5
nutrient t2
H2 deepwell casamino FREE
-1.3
-0.2
-0.4
+0.0
+0.4
nutrient t2
H2 deepwell acetate and vitamin FREE
-1.1
-0.2
+0.3
+0.1
-0.6
stress
McCas_H2_complete potassium hexahydroxoantimonate 0.125 mM
-1.4
+0.0
+0.2
-0.1
+0.3
stress
McCas_formate_complete mercury (II) chloride 0.227272727272727 mM
-1.3
-0.1
+0.1
+0.3
+0.4
nitrogen source
H2 N-free with 10mM Uridine
-1.0
-0.3
+0.4
+0.2
+0.3
stress
McCas_formate_complete sulfate 125 mM
-1.2
-0.1
-0.1
-0.0
+1.0
stress
McCas_H2_complete Zinc Pyrithione 0.0142857142857143 mM
+1.0
-0.2
+0.0
-0.2
-0.8
stress
McCas_formate_complete 3-nitroxypropanol 0.000416666666666667 mM
-1.0
-0.3
+0.1
+0.3
+0.8
stress
McCas_H2_complete metronidazole 0.000833333333333333
+0.8
+0.2
-0.5
+0.2
-0.8
nitrogen source
H2 N-free with 10mM L-Methionine
+1.0
+0.1
-0.2
-0.1
-0.7
stress
McCas_H2_complete Hydroxylamine 1.04166666666667 mM
+1.2
-0.2
-0.3
-0.2
-0.3
nutrient t2
H2 deepwell acetate FREE
+1.1
-0.3
-0.2
+0.3
-0.4
no stress control
McCas_H2_complete no stress control
+1.3
-0.3
+0.4
-0.2
-0.5
nitrogen source
H2 N-free with 2mM Adenosine
-0.8
+0.4
+0.2
+0.5
+0.5
stress
McCas_H2_complete silver chloride 0.5 mM
+1.0
+0.1
+0.2
+0.2
-0.6
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
+1.7
-0.2
-0.2
-0.3
+0.0
stress
McCas_H2_complete dimetridazole 0.000833333333333333 mM
+1.6
+0.0
+0.1
-0.1
-0.5
no stress control
McCas_H2_complete no stress control
+0.8
-0.1
+0.5
+0.4
-0.4
stress
McCas_formate_complete Fluorophosphate 62.5 mM
+1.2
-0.4
+0.1
+0.1
+0.3
stress
McCas_H2_complete sodium nitrite 1.04166666666667 mM
+1.9
-0.0
+0.0
-0.2
+0.1
stress
McCas_formate_complete metavanadate 4.54545454545455 mM
+7.0
+0.6
-0.3
+0.0
+0.1
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