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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS02485 and MMP_RS02490 overlap by 14 nucleotides
MMP_RS02490 and MMP_RS02495 are separated by 11 nucleotides
MMP_RS02495 and MMP_RS02500 are separated by 1 nucleotides
MMP_RS02500 and MMP_RS02505 are separated by 3 nucleotides
MMP_RS02485: MMP_RS02485 - DUF2080 family transposase-associated protein, at 465,000 to 465,224
_RS02485
MMP_RS02490: MMP_RS02490 - hypothetical protein, at 465,211 to 465,405
_RS02490
MMP_RS02495: MMP_RS02495 - hypothetical protein, at 465,417 to 465,800
_RS02495
MMP_RS02500: MMP_RS02500 - minichromosome maintenance protein MCM, at 465,802 to 467,826
_RS02500
MMP_RS02505: MMP_RS02505 - DUF2540 domain-containing protein, at 467,830 to 468,102
_RS02505
Group
Condition
MMP
_RS02485
MMP
_RS02490
MMP
_RS02495
MMP
_RS02500
MMP
_RS02505
stress
McCas_formate_complete nitrate 35.7142857142857 mM
N.D.
-0.9
-2.2
+0.0
N.D.
stress
McCas_H2_complete Benzethonium chloride 0.00625 mM
N.D.
-1.8
-0.7
-0.1
N.D.
stress
McCas_formate_complete 2-bromoethanesulfonic 4.16666666666667E-05 mM
N.D.
-0.9
-1.3
-0.3
N.D.
stress
McCas_formate_complete hypophosphite 125 mM
N.D.
-0.8
-1.4
-0.1
N.D.
stress
McCas_formate_complete sodium nitrite 0.416666666666667 mM
N.D.
-0.7
-1.0
-0.3
N.D.
stress
McCas_formate_complete sodium nitrite 0.416666666666667 mM
N.D.
-1.2
+0.4
-1.1
N.D.
stress
McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
N.D.
-1.3
-0.6
+0.1
N.D.
stress
McCas_H2_complete 5-Fluorouracil 0.00833333333333333 mM
N.D.
-1.5
+0.3
-0.5
N.D.
stress
McCas_formate_complete Chloride 500 mM
N.D.
+0.3
-1.6
-0.2
N.D.
nutrient t2
H2 deepwell acetate and casamino FREE
N.D.
+0.4
-1.5
-0.3
N.D.
stress
McCas_formate_complete 3-nitroxypropanol 0.000416666666666667 mM
N.D.
+0.9
-1.5
-0.5
N.D.
stress
McCas_formate_complete Fluorophosphate 62.5 mM
N.D.
-1.0
+0.6
-0.6
N.D.
nutrient t2
H2 deepwell acetate and casamino FREE
N.D.
+1.0
-1.2
-0.6
N.D.
nutrient t2
H2 deepwell autotrophic conditions
N.D.
+1.0
-1.2
-0.3
N.D.
nutrient t2
H2 deepwell acetate and casamino FREE
N.D.
+0.8
-0.9
-0.2
N.D.
nutrient t2
H2 deepwell vitamin and casamino FREE
N.D.
+0.7
-1.1
+0.2
N.D.
stress
McCas_H2_complete metronidazole 0.000833333333333333
N.D.
-0.5
-0.6
+1.0
N.D.
stress
McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM
N.D.
+1.0
-0.6
-0.4
N.D.
nutrient t2
H2 deepwell acetate and casamino FREE
N.D.
+1.3
-1.2
+0.1
N.D.
stress
McCas_formate_complete Fluorophosphate 62.5 mM
N.D.
+0.8
-0.8
+0.3
N.D.
stress
McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
N.D.
-0.1
+1.4
-0.5
N.D.
stress
McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM
N.D.
+1.3
-0.6
+0.2
N.D.
rich t1
H2 McCas deepwell complete
N.D.
+1.5
-0.6
-0.0
N.D.
stress
McCas_H2_complete 1,2-dimethyl-5-nitroimidazole 0.00833333333333333 mM
N.D.
+1.7
-0.5
-0.2
N.D.
stress
McCas_formate_complete arsenate 0.416666666666667 mM
N.D.
-0.1
+2.0
-0.8
N.D.
stress
McCas_H2_complete Cadmium chloride hemipentahydrate 0.555555555555556 mM
N.D.
+1.8
-0.4
+0.1
N.D.
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
N.D.
+0.3
+1.2
+0.5
N.D.
nitrogen source
H2 N-free with 5mM Inosine
N.D.
+0.1
+1.5
+0.6
N.D.
no stress control
McCas_H2_complete no stress control
N.D.
+0.7
+1.3
+0.3
N.D.
nutrient t1
Mc formate, casamino free, with 10mM L-Threonine
N.D.
+1.2
+1.6
-0.1
N.D.
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