Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS02470 and MMP_RS02475 are separated by 154 nucleotidesMMP_RS02475 and MMP_RS02480 are separated by 98 nucleotidesMMP_RS02480 and MMP_RS02485 are separated by 2 nucleotidesMMP_RS02485 and MMP_RS02490 overlap by 14 nucleotides MMP_RS02470: MMP_RS02470 - helix-turn-helix transcriptional regulator, at 463,612 to 463,974 _RS02470 MMP_RS02475: MMP_RS02475 - hypothetical protein, at 464,129 to 464,380 _RS02475 MMP_RS02480: MMP_RS02480 - hypothetical protein, at 464,479 to 464,997 _RS02480 MMP_RS02485: MMP_RS02485 - DUF2080 family transposase-associated protein, at 465,000 to 465,224 _RS02485 MMP_RS02490: MMP_RS02490 - hypothetical protein, at 465,211 to 465,405 _RS02490
Group Condition MMP_RS02470 MMP_RS02475 MMP_RS02480 MMP_RS02485 MMP_RS02490
stress McCas_H2_complete metronidazole 0.000833333333333333 -1.2 -0.5 -1.7 N.D. -0.5
stress McCas_formate_complete sulfate 125 mM -2.2 -0.8 -0.3 N.D. -0.5
stress McCas_formate_complete Rifampicin 0.5 mM -2.8 -0.2 -0.6 N.D. -0.2
stress McCas_formate_complete Fluorophosphate 62.5 mM -1.2 +0.1 -1.1 N.D. -1.0
stress McCas_H2_complete Hydroxylamine 2.08333333333333 mM -2.1 +0.4 +0.1 N.D. -0.9
stress McCas_H2_complete 2-bromoethanesulfonic 0.00833333333333333 mM -2.6 +0.7 +0.0 N.D. -0.3
stress McCas_H2_complete Magnesium chloride 250 mM -2.0 +0.2 -0.9 N.D. +0.8
stress McCas_H2_complete Thioridazine 0.1 mM +1.4 -0.7 -1.2 N.D. -1.2
stress McCas_H2_complete 5-Fluorouracil 0.00833333333333333 mM +0.4 +0.6 -0.8 N.D. -1.5
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM -1.5 -0.0 +1.2 N.D. -0.7
stress McCas_H2_complete Benzethonium chloride 0.00625 mM +0.6 +0.4 +0.3 N.D. -1.8
rich t1 H2 McCas deepwell complete -1.1 +0.8 -0.7 N.D. +0.6
stress McCas_H2_complete Fluorophosphate 62.5 mM +1.5 +0.1 -1.4 N.D. -0.4
stress McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM -1.8 -0.4 +1.0 N.D. +1.0
stress McCas_H2_complete Cadmium chloride hemipentahydrate 0.555555555555556 mM -0.7 -0.3 -0.7 N.D. +1.8
stress McCas_H2_complete 1,2-dimethyl-5-nitroimidazole 0.00833333333333333 mM -0.6 -0.4 -0.6 N.D. +1.7
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations +1.2 +0.8 -0.8 N.D. -0.7
nitrogen source Mc_H2_N_Free L-Glutamine 10 mM +1.4 -1.3 +0.2 N.D. +0.2
stress McCas_formate_complete Econazole nitrate salt 0.02 mM +1.1 -0.2 +1.4 N.D. -1.3
rich t2 H2 McCas deepwell complete +1.4 +1.1 -1.3 N.D. -0.1
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM +2.0 +0.1 +0.5 N.D. -1.2
stress McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM +0.7 +0.8 +1.3 N.D. -1.3
stress McCas_formate_complete Antimycin A 0.01 mM +1.4 -0.6 +0.8 N.D. +0.5
nitrogen source H2 N-free with 10mM L-tyrosine -0.7 +0.3 +1.8 N.D. +0.8
stress McCas_formate_complete gold (III) chloride 0.0714285714285714 mM +0.7 -0.2 +1.7 N.D. +0.5
no stress control McCas_H2_complete no stress control +0.9 +1.3 -0.3 N.D. +0.9
natural competence H2 McCas- cells incubated with 5000 ng DNA (pDNA pLW40neo) then transferred and grown in liquid medium with neomycin +0.3 +3.8 +0.5 N.D. -1.0
stress McCas_H2_complete Chloride 250 mM +0.7 +0.9 +2.1 N.D. +0.0
stress Formate with Bacitracin 15.6 uM +2.0 +0.7 +0.9 N.D. +0.5
natural competence H2 McCas- cells grown in liquid medium with neomycin -0.6 +3.0 +1.6 N.D. +0.3
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