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Protein
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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS02445 and MMP_RS02450 are separated by 273 nucleotides
MMP_RS02450 and MMP_RS02455 are separated by 12 nucleotides
MMP_RS02455 and MMP_RS02460 are separated by 165 nucleotides
MMP_RS02460 and MMP_RS02465 are separated by 153 nucleotides
MMP_RS02445: MMP_RS02445 - putative DNA binding domain-containing protein, at 456,701 to 458,044
_RS02445
MMP_RS02450: MMP_RS02450 - hypothetical protein, at 458,318 to 458,512
_RS02450
MMP_RS02455: MMP_RS02455 - hypothetical protein, at 458,525 to 459,142
_RS02455
MMP_RS02460: MMP_RS02460 - hypothetical protein, at 459,308 to 462,367
_RS02460
MMP_RS02465: MMP_RS02465 - hypothetical protein, at 462,521 to 463,246
_RS02465
Group
Condition
MMP
_RS02445
MMP
_RS02450
MMP
_RS02455
MMP
_RS02460
MMP
_RS02465
stress
McCas_formate_complete sulfate 125 mM
-0.2
-0.6
-0.5
+0.0
-0.1
stress
McCas_H2_complete 5-Fluorouracil 0.00833333333333333 mM
+0.1
-0.6
-0.4
+0.0
-0.3
stress
McCas_formate_complete arsenate 0.416666666666667 mM
-0.3
-0.5
-0.2
+0.1
-0.1
stress
McCas_formate_complete gold (III) chloride 0.0714285714285714 mM
-0.2
-0.5
-0.4
+0.2
+0.1
stress
McCas_H2_complete 1,2-dimethyl-5-nitroimidazole 0.00833333333333333 mM
+0.3
-0.9
-0.3
+0.1
+0.1
nutrient t2
H2 deepwell acetate and vitamin FREE
+0.2
-0.5
-0.1
+0.2
-0.4
stress
McCas_H2_complete Anhydrotetracycline 0.05 mM
+0.3
-0.7
-0.4
-0.0
+0.2
stress
McCas_H2_complete potassium hexahydroxoantimonate 0.125 mM
+0.2
-0.2
-0.3
+0.3
-0.4
stress
McCas_H2_complete dimetridazole 0.000833333333333333 mM
+0.1
-0.4
-0.6
-0.1
+0.4
stress
McCas_H2_complete Hydroxylamine 2.08333333333333 mM
+0.3
-0.5
+0.0
+0.2
-0.4
nutrient t2
H2 deepwell acetate FREE
+0.2
-0.2
-0.7
+0.2
+0.1
no stress control
McCas_H2_complete no stress control
+0.1
-0.6
+0.4
+0.1
-0.4
stress
McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
+0.4
-0.5
-0.3
+0.0
+0.2
stress
Formate McCas no stress control 2
+0.3
-0.3
-0.7
+0.2
+0.3
stress
McCas_H2_complete Antimycin A 0.01 mM
+0.2
-0.7
-0.0
+0.2
+0.5
nutrient t2
H2 deepwell vitamin FREE
+0.2
-0.5
+0.2
+0.2
+0.3
natural competence
H2 McCas- cells grown in liquid medium with neomycin
-0.1
+0.6
+0.4
-0.1
-0.3
nitrogen source
H2 N-free with 10mM B-Alanine
+0.0
+1.4
-0.2
-0.0
-0.4
nutrient t2
H2 deepwell acetate and casamino FREE
-0.2
+0.7
+0.3
+0.2
-0.1
nitrogen source
H2 N-free with 10mM L-Serine
+0.1
+1.0
-0.3
-0.0
+0.2
nitrogen source
H2 N-free with 10mM B-Alanine
-0.1
+0.9
-0.1
+0.1
+0.2
natural competence
H2 McCas- cells incubated with 5000 ng DNA (pDNA pLW40neo) then transferred and grown in liquid medium with neomycin
-0.2
+1.1
+0.1
+0.0
+0.1
stress
McCas_formate_complete dimetridazole 0.00416666666666667 mM
-0.2
+0.0
+0.4
-0.0
+1.0
nitrogen source
H2 N-free with 10mM L-Serine
-0.0
+0.8
+0.2
+0.1
+0.3
natural competence
H2 McCas- cells grown in liquid medium with neomycin
-0.1
+1.0
+0.5
-0.0
+0.0
stress
McCas_H2_complete Chloride 250 mM
-0.2
+1.2
-0.1
-0.0
+0.5
nitrogen source
H2 N-free with 2mM Adenosine
+0.1
+0.5
+0.6
+0.1
+0.4
natural competence
H2 McCas- cells grown in liquid medium with neomycin
+0.2
+1.0
+0.4
+0.0
+0.2
stress
H2 50 mM hypophosphite
+2.2
+0.9
-0.2
+1.4
+1.0
stress
H2 50 mM hypophosphite
+2.3
+2.1
-0.4
+1.9
+1.6
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