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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS02395 and MMP_RS02400 are separated by 41 nucleotides
MMP_RS02400 and MMP_RS02405 are separated by 127 nucleotides
MMP_RS02405 and MMP_RS02410 are separated by 115 nucleotides
MMP_RS02410 and MMP_RS02415 are separated by 103 nucleotides
MMP_RS02395: MMP_RS02395 - hypothetical protein, at 445,611 to 445,883
_RS02395
MMP_RS02400: MMP_RS02400 - site-2 protease family protein, at 445,925 to 446,938
_RS02400
MMP_RS02405: MMP_RS02405 - hypothetical protein, at 447,066 to 447,587
_RS02405
MMP_RS02410: MMP_RS02410 - ABC transporter substrate-binding protein, at 447,703 to 448,449
_RS02410
MMP_RS02415: MMP_RS02415 - site-specific integrase, at 448,553 to 449,101
_RS02415
Group
Condition
MMP
_RS02395
MMP
_RS02400
MMP
_RS02405
MMP
_RS02410
MMP
_RS02415
stress
McCas_formate_complete Chloride 250 mM
+0.0
+0.1
+0.3
-2.3
-2.2
stress
McCas_H2_complete Econazole nitrate salt 0.02 mM
-0.7
-0.2
-0.4
-0.7
-0.6
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 10 generations
-0.1
-0.4
-0.7
-0.3
-1.0
nutrient t2
H2 deepwell vitamin FREE
-1.0
-0.1
+0.1
+0.0
-1.3
stress
McCas_formate_complete Chlorite 0.3125 mM
-0.1
-0.1
+0.1
-0.3
-1.9
stress
McCas_H2_complete 2-bromoethanesulfonic 0.00833333333333333 mM
+0.1
-0.4
+0.2
-0.3
-1.9
rich t2
H2 McCas deepwell complete
-0.7
+0.0
-1.1
+0.4
-0.9
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
-0.0
-0.4
-0.5
-1.3
+0.2
stress
McCas_H2_complete Benzethonium chloride 0.003125 mM
-0.8
-0.6
+0.3
-0.6
-0.4
stress
McCas_H2_complete Spiramycin 0.1 mM
-0.4
+0.2
+0.3
-1.3
-0.4
stress
McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
-0.7
-0.2
-1.1
+0.7
-0.2
stress
McCas_H2_complete Fluorophosphate 62.5 mM
-0.3
+0.1
+0.6
-1.1
-0.8
stress
McCas_H2_complete 2-bromoethanesulfonic 0.00833333333333333 mM
+0.4
-0.3
+0.3
-1.4
+0.1
stress
McCas_formate_complete 3-nitroxypropanol 0.000416666666666667 mM
-0.3
-0.1
+1.0
-1.0
-0.5
stress
Formate with Bacitracin 15.6 uM
+0.2
+0.1
+0.3
-2.0
+1.0
stress
McCas_formate_complete 2-bromoethanesulfonic 0.00833333333333333 mM
-0.4
-0.5
+0.4
+0.7
-0.5
stress
McCas_H2_complete metronidazole 0.000833333333333333
+0.4
+0.5
-1.5
+0.4
+0.1
stress
McCas_H2_complete dimetridazole 0.000833333333333333 mM
+0.0
+0.4
-1.4
+0.9
+0.0
nutrient t2
H2 deepwell acetate FREE
-1.0
-0.1
+0.2
-0.2
+1.4
stress
McCas_H2_complete Sulfaquinoxaline 0.1 mM
+0.1
-0.2
-0.1
+1.3
-0.9
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
+0.3
-0.8
-0.6
+1.3
+0.0
stress
McCas_H2_complete sodium bromide 250 mM
-0.3
-0.1
-0.2
+1.5
-0.5
nutrient t2
H2 deepwell acetate and vitamin FREE
-0.4
-0.4
-0.0
+1.7
-0.0
stress
McCas_H2_complete phosphate monobasic 83.3333333333333 mM
-0.1
-0.2
+0.8
+1.0
-0.4
stress
McCas_H2_complete Sulfaquinoxaline 0.1 mM
-0.1
-0.0
+0.0
+2.0
-0.5
nutrient t2
H2 deepwell acetate and casamino FREE
+0.5
-0.3
+0.6
+0.5
+0.6
no stress control
McCas_H2_complete no stress control
+0.5
-0.0
-0.2
+1.2
+0.6
stress
McCas_H2_complete sulfate 125 mM
+0.5
+0.3
-0.4
+1.1
+0.8
stress
McCas_formate_complete 3-nitroxypropanol 0.000416666666666667 mM
+0.0
+0.1
+0.4
+1.9
+0.7
stress
McCas_formate_complete Fluorophosphate 62.5 mM
+0.1
-0.2
+0.5
+0.4
+2.7
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