Fitness for 5 genes in Methanococcus maripaludis S2

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	MMP_RS02345	MMP_RS02350	MMP_RS02355	MMP_RS02360	MMP_RS02365
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations	-7.4	N.D.	-10.4	-0.0	-0.1
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations	-6.7	N.D.	-10.5	+0.2	+0.0
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations	-6.9	N.D.	-9.9	+0.2	+0.0
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations	-6.8	N.D.	-9.8	+0.4	-0.0
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations	-7.4	N.D.	-6.9	+0.2	-0.1
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations	-7.4	N.D.	-6.8	-0.0	+0.1
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations	-7.7	N.D.	-5.4	-0.0	+0.2
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations	-6.6	N.D.	-6.4	+0.2	-0.0
mixed community	Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations	-3.3	N.D.	-9.3	+0.2	-0.2
nutrient t2	Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE	-5.5	N.D.	-5.5	+0.1	+0.1
nutrient t2	H2 deepwell casamino FREE	-4.5	N.D.	-6.3	+0.2	-0.1
nitrogen source	H2 N-free with 10mM L-Methionine	-4.0	N.D.	-6.5	-0.0	-0.1
stress	Formate 100 mM hypophosphite	-5.2	N.D.	-5.6	+0.2	-0.1
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE	-5.3	N.D.	-5.4	-0.1	+0.2
nutrient t2	H2 deepwell casamino FREE	-6.3	N.D.	-3.7	+0.2	-0.5
nutrient t2	H2 deepwell acetate and vitamin FREE	-3.3	N.D.	-6.1	-0.0	+0.0
rich t2	Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE	-5.0	N.D.	-4.2	-0.0	-0.0
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2	-4.7	N.D.	-4.4	-0.0	+0.1
rich t2	H2 McCas deepwell complete	-5.1	N.D.	-3.8	-0.3	+0.1
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE	-3.8	N.D.	-5.2	-0.0	+0.1
nutrient t2	H2 deepwell vitamin FREE	-4.2	N.D.	-3.6	-0.3	-0.8
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE	-4.8	N.D.	-4.2	-0.1	+0.1
rich t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2	-4.8	N.D.	-4.0	-0.1	+0.1
rich t2	Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE	-4.9	N.D.	-3.9	+0.1	+0.1
nutrient t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE	-4.2	N.D.	-4.7	-0.1	+0.4
nutrient t2	H2 deepwell vitamin and casamino FREE	-5.1	N.D.	-3.4	+0.4	-0.3
nutrient t2	H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE	-4.6	N.D.	-3.8	-0.2	+0.3
nitrogen source	H2 N-free with 10mM L-Lysine	-3.2	N.D.	-5.2	+0.3	+0.5
natural competence	H2 McCas- cells incubated with 5000 ng DNA (pDNA pLW40neo) then transferred and grown in liquid medium with neomycin	+0.7	N.D.	+8.3	-0.1	+0.0
stress	McCas_formate_complete nitrate 35.7142857142857 mM	+4.2	N.D.	+7.4	-0.3	-0.5