Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS02220 and MMP_RS02225 are separated by 19 nucleotidesMMP_RS02225 and MMP_RS02230 are separated by 142 nucleotidesMMP_RS02230 and MMP_RS08940 are separated by 33 nucleotidesMMP_RS08940 and MMP_RS02235 are separated by 195 nucleotides MMP_RS02220: MMP_RS02220 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase, at 418,670 to 419,395 _RS02220 MMP_RS02225: MMP_RS02225 - carbohydrate kinase family protein, at 419,415 to 420,323 _RS02225 MMP_RS02230: MMP_RS02230 - sodium-dependent transporter, at 420,466 to 421,977 _RS02230 MMP_RS08940: MMP_RS08940 - MetS family NSS transporter small subunit, at 422,011 to 422,091 _RS08940 MMP_RS02235: MMP_RS02235 - CBS domain-containing protein, at 422,287 to 423,252 _RS02235
Group Condition MMP_RS02220 MMP_RS02225 MMP_RS02230 MMP_RS08940 MMP_RS02235
stress McCas_H2_complete Chloride 250 mM N.D. -0.5 -0.4 -6.9 -1.1
stress McCas_H2_complete 2-Mercaptopyridine N-oxide 0.02 mM N.D. -0.0 -3.1 -2.8 -2.2
stress McCas_H2_complete 2-Mercaptopyridine N-oxide 0.02 mM N.D. -0.5 -3.0 -2.2 -1.8
stress McCas_H2_complete Zinc Pyrithione 0.0142857142857143 mM N.D. -0.2 -2.4 -2.2 -2.3
stress McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM N.D. -0.8 -0.5 -1.8 -3.8
stress McCas_H2_complete Zinc Pyrithione 0.0142857142857143 mM N.D. +0.2 -2.0 -3.0 -1.9
stress McCas_formate_complete 3-nitroxypropanol 0.00833333333333333 mM N.D. -1.0 -0.4 -2.9 -2.1
nitrogen source H2 N-free with 10mM Thymidine N.D. -1.8 -1.2 -3.4 -0.0
stress McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM N.D. -0.6 -0.3 -1.7 -3.7
nutrient t2 H2 deepwell acetate FREE N.D. -1.4 -0.8 -1.8 -2.2
stress McCas_formate_complete 3-nitroxypropanol 0.0015625 mM N.D. -0.7 -0.3 -1.2 -4.0
stress McCas_H2_complete Nitrofurantoin 0.1 mM N.D. -0.3 -0.6 -1.5 -3.7
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations N.D. -1.3 -2.8 -0.1 -1.9
nitrogen source H2 N-free with 10mM L-Glutamic N.D. -0.1 -0.7 -1.5 -3.6
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations N.D. -1.2 -2.6 +0.7 -1.9
stress McCas_formate_complete nitrate 35.7142857142857 mM N.D. -0.5 -0.6 -1.9 +5.5
nitrogen source H2 N-free with 5mM Inosine N.D. +3.6 -0.8 +1.8 +0.1
nitrogen source H2 N-free with 5mM Inosine N.D. +3.6 -0.9 +2.2 +0.0
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. +0.3 +0.6 +4.9 -0.8
nutrient t1 Mc formate, casamino free, with 10mM L-Threonine N.D. -0.5 +7.9 +0.1 -1.4
nutrient t1 Mc formate, casamino free, with 10mM L-Threonine N.D. -0.2 +8.2 +0.5 -1.6
nutrient t1 Mc formate, casamino free, with 10mM L-Threonine N.D. -0.3 +8.4 +0.6 -1.5
nitrogen source Formate N-free with 2mM Adenosine N.D. +14.0 -0.1 -2.3 -3.2
nitrogen source H2 N-free with 10mM L-Threonine N.D. -0.8 +12.2 -1.3 -1.7
nitrogen source Formate N-free with 2mM Adenosine N.D. +13.3 -0.1 -1.3 -3.2
nitrogen source Formate N-free with 2mM Adenosine N.D. +13.3 -0.2 -0.9 -3.2
nitrogen source H2 N-free with 10mM L-Threonine N.D. -0.1 +11.5 -0.5 -1.8
nitrogen source H2 N-free with 10mM Uridine N.D. +10.0 +0.5 +2.5 -0.2
nitrogen source H2 N-free with 10mM Uridine N.D. +10.3 +0.7 +2.2 -0.3
nitrogen source H2 N-free with 2mM Adenosine N.D. +14.0 +0.1 +0.4 +0.6
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