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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS02030 and MMP_RS02035 are separated by 78 nucleotides
MMP_RS02035 and MMP_RS02040 are separated by 417 nucleotides
MMP_RS02040 and MMP_RS02045 are separated by 213 nucleotides
MMP_RS02045 and MMP_RS02050 are separated by 86 nucleotides
MMP_RS02030: MMP_RS02030 - homoaconitase small subunit, at 379,024 to 379,512
_RS02030
MMP_RS02035: MMP_RS02035 - ribosome biogenesis/translation initiation ATPase RLI, at 379,591 to 381,363
_RS02035
MMP_RS02040: MMP_RS02040 - S-layer protein, at 381,781 to 383,508
_RS02040
MMP_RS02045: MMP_RS02045 - tRNA-Met, at 383,722 to 383,800
_RS02045
MMP_RS02050: MMP_RS02050 - tRNA-Met, at 383,887 to 383,965
_RS02050
Group
Condition
MMP
_RS02030
MMP
_RS02035
MMP
_RS02040
MMP
_RS02045
MMP
_RS02050
stress
McCas_formate_complete Chloride 250 mM
N.D.
N.D.
N.D.
-2.8
N.D.
nitrogen source
H2 N-free with 10mM B-Alanine
N.D.
N.D.
N.D.
-2.4
N.D.
nitrogen source
H2 N-free with 2mM Adenosine
N.D.
N.D.
N.D.
-2.0
N.D.
stress
McCas_H2_complete 5-Fluorouracil 0.00833333333333333 mM
N.D.
N.D.
N.D.
-1.7
N.D.
stress
McCas_formate_complete 2-bromoethanesulfonic 0.00833333333333333 mM
N.D.
N.D.
N.D.
-1.7
N.D.
nitrogen source
Formate N-free with 2mM Adenosine
N.D.
N.D.
N.D.
-1.6
N.D.
stress
Formate with Bacitracin 15.6 uM
N.D.
N.D.
N.D.
-1.5
N.D.
nitrogen source
H2 N-free with 10mM L-Leucine
N.D.
N.D.
N.D.
+1.4
N.D.
nitrogen source
H2 N-free with 10mM Cytidine
N.D.
N.D.
N.D.
+1.4
N.D.
stress
McCas_formate_complete nitrate 35.7142857142857 mM
N.D.
N.D.
N.D.
+1.4
N.D.
stress
McCas_H2_complete Benzethonium chloride 0.003125 mM
N.D.
N.D.
N.D.
+1.4
N.D.
stress
McCas_H2_complete potassium hexahydroxoantimonate 0.125 mM
N.D.
N.D.
N.D.
+1.5
N.D.
nitrogen source
N2 fixation, H2 media
N.D.
N.D.
N.D.
+1.5
N.D.
nutrient t2
H2 deepwell acetate and vitamin FREE
N.D.
N.D.
N.D.
+1.5
N.D.
rich t2
H2 McCas deepwell complete
N.D.
N.D.
N.D.
+1.5
N.D.
nitrogen source
H2 N-free with 10mM Glycine
N.D.
N.D.
N.D.
+1.5
N.D.
nitrogen source
H2 N-free with 2.5mM Cytosine
N.D.
N.D.
N.D.
+1.5
N.D.
stress
McCas_H2_complete Phenazine methosulfate 0.0333333333333333 mM
N.D.
N.D.
N.D.
+1.5
N.D.
nitrogen source
H2 N-free with 10mM L-Cysteine
N.D.
N.D.
N.D.
+1.5
N.D.
nitrogen source
H2 N-free with 10mM Glycine
N.D.
N.D.
N.D.
+1.6
N.D.
nitrogen source
H2 N-free with 10mM L-Phenylalanine
N.D.
N.D.
N.D.
+1.6
N.D.
nitrogen source
H2 N-free with 10mM L-Phenylalanine
N.D.
N.D.
N.D.
+1.6
N.D.
stress
McCas_H2_complete molybdate 45.4545454545455 mM
N.D.
N.D.
N.D.
+1.6
N.D.
stress
McCas_H2_complete Chloride 500 mM
N.D.
N.D.
N.D.
+1.6
N.D.
nitrogen source
H2 N-free with 10mM L-Alanine
N.D.
N.D.
N.D.
+1.6
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations
N.D.
N.D.
N.D.
+1.8
N.D.
nutrient t1
H2 deepwell vitamin FREE
N.D.
N.D.
N.D.
+1.9
N.D.
no stress control
McCas_H2_complete no stress control
N.D.
N.D.
N.D.
+2.2
N.D.
stress
McCas_H2_complete sodium iodide 250 mM
N.D.
N.D.
N.D.
+2.8
N.D.
stress
McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
N.D.
N.D.
N.D.
+3.1
N.D.
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