Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS01840 and MMP_RS01845 are separated by 52 nucleotidesMMP_RS01845 and MMP_RS01850 are separated by 124 nucleotidesMMP_RS01850 and MMP_RS01855 are separated by 42 nucleotidesMMP_RS01855 and MMP_RS01860 are separated by 225 nucleotides MMP_RS01840: MMP_RS01840 - TIGR00289 family protein, at 339,867 to 340,538 _RS01840 MMP_RS01845: MMP_RS01845 - hypothetical protein, at 340,591 to 341,472 _RS01845 MMP_RS01850: MMP_RS01850 - phosphate ABC transporter substrate-binding protein, at 341,597 to 342,424 _RS01850 MMP_RS01855: MMP_RS01855 - 2-hydroxyacyl-CoA dehydratase family protein, at 342,467 to 343,588 _RS01855 MMP_RS01860: MMP_RS01860 - hypothetical protein, at 343,814 to 344,128 _RS01860
Group Condition MMP_RS01840 MMP_RS01845 MMP_RS01850 MMP_RS01855 MMP_RS01860
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations -7.3 +0.0 +0.1 +0.2 -0.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations -4.4 +0.0 +0.1 +0.2 +0.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations -3.8 -0.0 -0.0 +0.2 -0.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations -3.6 -0.1 +0.1 -0.0 +0.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations -3.7 -0.0 +0.1 +0.1 -0.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations -3.5 -0.1 -0.0 +0.1 -0.1
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -3.4 +0.1 +0.2 +0.2 -0.1
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -2.9 +0.1 +0.2 +0.2 -0.0
nutrient t2 H2 deepwell acetate and vitamin FREE -2.8 +0.2 -0.2 +0.2 +0.1
nutrient t2 H2 deepwell vitamin FREE -2.3 +0.1 +0.3 +0.1 -0.5
nutrient t2 H2 deepwell acetate FREE -2.3 -0.0 -0.5 +0.6 -0.0
nutrient t2 H2 deepwell vitamin and casamino FREE -2.3 +0.1 -0.3 +0.2 +0.2
nutrient t2 H2 deepwell acetate and vitamin FREE -2.5 +0.3 -0.1 +0.3 +0.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations -2.2 +0.2 +0.3 +0.2 -0.5
nitrogen source H2 N-free with 5mM Inosine -1.4 +0.1 +0.1 +0.5 -1.3
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -2.5 +0.2 +0.3 +0.2 -0.1
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -2.5 +0.3 +0.3 -0.0 +0.1
nutrient t2 H2 deepwell acetate and vitamin FREE -2.4 +0.2 +0.3 +0.3 +0.0
stress H2 McCas with 0.1 mM Na2S -2.6 +0.1 +0.3 +0.3 +0.3
stress H2 McCas with 1 mM Na2S -2.7 +0.1 +0.1 +0.4 +0.5
nutrient t2 H2 deepwell acetate FREE -2.5 -0.1 +0.3 +0.6 +0.4
stress H2 McCas with 1 mM Na2S -2.4 +0.2 +0.4 +0.4 +0.2
stress H2 McCas with 0.1 mM (NH4)2S -2.2 +0.1 +0.2 +0.2 +0.5
stress H2 McCas with 40 minute oxygen exposure -2.2 +0.2 +0.3 +0.3 +0.5
stress H2 McCas with 40 minute oxygen exposure -2.5 +0.3 +0.3 +0.5 +0.6
stress H2 McCas with 1 hour oxygen exposure -2.1 +0.3 +0.2 +0.6 +0.3
stress Formate 100 mM hypophosphite -1.9 -0.2 +0.5 +0.6 +0.2
stress McCas_H2_complete Antimycin A 0.01 mM -1.6 +0.5 +0.2 +0.9 +0.2
stress McCas_H2_complete metavanadate 4.54545454545455 mM -1.3 -0.1 +0.4 +0.4 +1.0
stress McCas_H2_complete Zinc Pyrithione 0.0142857142857143 mM -1.3 +0.4 +0.4 +0.8 +0.5
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