Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS01680 and MMP_RS01685 overlap by 8 nucleotidesMMP_RS01685 and MMP_RS01690 overlap by 4 nucleotidesMMP_RS01690 and MMP_RS01695 are separated by 367 nucleotidesMMP_RS01695 and MMP_RS01700 are separated by 91 nucleotides MMP_RS01680: MMP_RS01680 - phenylacetate--CoA ligase, at 308,925 to 310,169 _RS01680 MMP_RS01685: MMP_RS01685 - indolepyruvate oxidoreductase subunit beta, at 310,162 to 310,761 _RS01685 MMP_RS01690: MMP_RS01690 - indolepyruvate ferredoxin oxidoreductase subunit alpha, at 310,758 to 312,596 _RS01690 MMP_RS01695: MMP_RS01695 - fructose-1 6-bisphosphatase, at 312,964 to 314,115 _RS01695 MMP_RS01700: MMP_RS01700 - dihydroxy-acid dehydratase, at 314,207 to 315,859 _RS01700
Group Condition MMP_RS01680 MMP_RS01685 MMP_RS01690 MMP_RS01695 MMP_RS01700
stress McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM -0.2 -0.1 -0.7 N.D. -4.5
nutrient t2 Formate deepwell acetate FREE -0.2 -1.4 -0.5 N.D. -3.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations -0.1 -0.5 +0.2 N.D. -4.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations +0.2 -0.2 +0.1 N.D. -4.6
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations +0.2 -0.1 +0.1 N.D. -4.6
nutrient t2 H2 deepwell vitamin FREE +0.3 -0.7 -0.2 N.D. -3.8
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations +0.1 -0.1 +0.1 N.D. -4.5
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations +0.2 -0.0 +0.2 N.D. -4.7
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations +0.2 -0.2 +0.1 N.D. -4.5
stress McCas_H2_complete silver chloride 0.5 mM +0.1 +0.2 -0.0 N.D. -4.5
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations +0.1 -0.0 +0.2 N.D. -4.5
stress McCas_H2_complete Calcium Chloride Dihydrate 83.3333333333333 mM +0.2 +0.3 -0.0 N.D. -4.7
stress H2 McCas with 0.1 mM Na2S +0.1 +0.4 -0.0 N.D. -4.6
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE +0.1 +0.2 +0.1 N.D. -4.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations -0.2 -0.7 +0.6 N.D. -3.7
nutrient t2 H2 deepwell autotrophic conditions +0.0 -0.3 +0.5 N.D. -4.2
nutrient t2 H2 deepwell casamino FREE +0.0 +0.1 +0.3 N.D. -4.3
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 +0.1 +0.1 +0.2 N.D. -4.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations +0.4 -0.3 +0.1 N.D. -4.1
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 +0.2 +0.4 +0.1 N.D. -4.3
nutrient t2 H2 deepwell casamino FREE +0.0 +0.5 +0.1 N.D. -4.3
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 +0.0 +0.3 +0.3 N.D. -4.2
no stress control McCas_formate_complete no stress control -0.3 +0.7 +0.0 N.D. -3.7
stress McCas_H2_complete Bacitracin 0.003125 mM +0.0 -0.2 +0.8 N.D. -3.9
nutrient t2 H2 deepwell acetate and vitamin FREE +0.3 +0.4 +0.0 N.D. -4.0
no stress control McCas_H2_complete no stress control +0.1 +0.6 -0.2 N.D. -3.7
nutrient t2 H2 deepwell acetate and vitamin FREE +0.4 +0.5 +0.2 N.D. -4.1
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE +0.1 +0.3 +0.5 N.D. -3.8
rich t2 H2 McCas deepwell complete +0.3 +0.9 -0.0 N.D. -4.0
stress McCas_H2_complete Chloride 250 mM +0.4 +0.7 +0.6 N.D. -3.1
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