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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS01640 and MMP_RS01645 are separated by 72 nucleotides
MMP_RS01645 and MMP_RS01650 are separated by 156 nucleotides
MMP_RS01650 and MMP_RS01655 are separated by 9 nucleotides
MMP_RS01655 and MMP_RS01660 are separated by 124 nucleotides
MMP_RS01640: MMP_RS01640 - 2-oxoacid:acceptor oxidoreductase subunit alpha, at 303,341 to 305,053
_RS01640
MMP_RS01645: MMP_RS01645 - SWIM zinc finger family protein, at 305,126 to 305,815
_RS01645
MMP_RS01650: MMP_RS01650 - sulfurtransferase TusA family protein, at 305,972 to 306,184
_RS01650
MMP_RS01655: MMP_RS01655 - DsrE family protein, at 306,194 to 306,538
_RS01655
MMP_RS01660: MMP_RS01660 - hypothetical protein, at 306,663 to 307,247
_RS01660
Group
Condition
MMP
_RS01640
MMP
_RS01645
MMP
_RS01650
MMP
_RS01655
MMP
_RS01660
stress
McCas_formate_complete Cesium chloride 41.6666666666667 mM
+0.1
-0.9
-6.3
-0.5
-0.6
rich t2
H2 McCas, 5g/L bicarb, 40 psi H2CO2
-0.0
-0.2
-3.8
-0.6
+0.0
stress
McCas_formate_complete 3-nitroxypropanol 0.00833333333333333 mM
-0.0
+0.1
-1.8
-1.9
-0.2
stress
McCas_formate_complete dimetridazole 0.00416666666666667 mM
+0.1
-0.5
-0.6
-2.2
-0.4
stress
McCas_H2_complete Benzethonium chloride 0.00625 mM
+0.2
+0.6
-4.1
-0.1
+0.4
nutrient t2
H2 deepwell acetate and casamino FREE
+0.8
-0.4
-3.5
-0.0
+0.8
nitrogen source
H2 N-free with 10mM L-Serine
-0.1
-0.5
-2.3
+0.5
+0.1
stress
McCas_H2_complete Chloride 250 mM
-0.2
-1.9
+0.8
+0.4
-1.0
nitrogen source
H2 N-free with 10mM L-Methionine
+0.4
-0.2
-1.0
-1.0
+0.9
stress
McCas_formate_complete Rifampicin 0.5 mM
+0.5
+0.8
-1.3
-1.3
+0.6
stress
McCas_H2_complete Irgasan 0.025 mM
+0.2
+1.9
-1.5
-0.6
-0.4
stress
McCas_H2_complete Spiramycin 0.1 mM
+0.5
-0.9
+1.4
-0.5
-0.1
stress
McCas_formate_complete sulfate 125 mM
+0.0
+1.7
+0.9
-1.1
-1.0
nitrogen source
H2 N-free with 5mM Inosine
+0.0
-0.6
-1.2
+1.3
+0.9
stress
McCas_formate_complete Antimycin A 0.01 mM
+0.4
+0.1
+1.9
-1.3
-0.3
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
-0.3
+1.1
-1.3
-0.1
+1.4
nutrient t2
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE
-0.0
-0.3
-0.9
+1.2
+1.3
stress
McCas_H2_complete potassium hexahydroxoantimonate 0.125 mM
+0.4
-0.3
-1.6
+2.1
+0.7
nutrient t1
Mc formate, casamino free, with 10mM L-Threonine
+0.1
-0.4
+2.6
-1.2
+0.4
stress
McCas_H2_complete Econazole nitrate salt 0.02 mM
+0.2
+0.8
+1.7
-0.5
-0.4
stress
McCas_formate_complete Fluorophosphate 62.5 mM
-0.2
+0.4
+1.3
-0.6
+1.1
stress
McCas_formate_complete Spiramycin 0.1 mM
-0.2
+0.2
+2.2
-0.9
+0.7
stress
McCas_H2_complete Cesium chloride 41.6666666666667 mM
+0.3
+1.9
+0.7
-0.2
-0.6
stress
McCas_formate_complete Spiramycin 0.1 mM
+0.1
+0.6
+1.6
-0.6
+0.8
nutrient t2
H2 deepwell vitamin FREE
+0.4
-0.8
+1.7
+0.5
+0.8
stress
McCas_H2_complete silver chloride 0.5 mM
-0.3
+1.7
-0.2
+1.7
-0.1
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
-0.3
-0.0
+0.8
+1.1
+1.2
stress
McCas_H2_complete sodium bromide 250 mM
+0.4
+0.8
+2.5
-0.3
-0.3
stress
McCas_H2_complete Fluorophosphate 62.5 mM
+0.2
+0.8
+2.2
+0.0
+0.5
stress
McCas_H2_complete sodium bromide 250 mM
+0.5
+1.2
+4.7
-0.3
+0.4
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