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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS01625 and MMP_RS01630 are separated by 65 nucleotides
MMP_RS01630 and MMP_RS01635 are separated by 46 nucleotides
MMP_RS01635 and MMP_RS01640 are separated by 5 nucleotides
MMP_RS01640 and MMP_RS01645 are separated by 72 nucleotides
MMP_RS01625: MMP_RS01625 - rubredoxin, at 301,467 to 301,604
_RS01625
MMP_RS01630: MMP_RS01630 - N-glycosylase/DNA lyase, at 301,670 to 302,428
_RS01630
MMP_RS01635: MMP_RS01635 - thiamine pyrophosphate-dependent enzyme, at 302,475 to 303,335
_RS01635
MMP_RS01640: MMP_RS01640 - 2-oxoacid:acceptor oxidoreductase subunit alpha, at 303,341 to 305,053
_RS01640
MMP_RS01645: MMP_RS01645 - SWIM zinc finger family protein, at 305,126 to 305,815
_RS01645
Group
Condition
MMP
_RS01625
MMP
_RS01630
MMP
_RS01635
MMP
_RS01640
MMP
_RS01645
stress
McCas_H2_complete Chloride 250 mM
+0.2
+0.4
-0.4
-0.2
-1.9
no stress control
McCas_formate_complete no stress control
-0.0
-0.6
-0.5
+0.5
-0.6
stress
McCas_formate_complete dimetridazole 0.00416666666666667 mM
+0.1
+0.8
-0.7
+0.1
-0.5
stress
McCas_H2_complete 1,2-dimethyl-5-nitroimidazole 0.00833333333333333 mM
-0.3
+0.9
+0.2
-0.5
-0.5
stress
McCas_H2_complete Spiramycin 0.1 mM
-0.1
+0.5
+0.2
+0.5
-0.9
nutrient t2
H2 deepwell vitamin FREE
+0.3
+0.8
-0.4
+0.4
-0.8
stress
McCas_H2_complete sulfate 125 mM
+0.0
+0.8
+0.6
+0.3
-0.6
nitrogen source
H2 N-free with 10mM L-tyrosine
+0.2
-0.1
-0.5
+0.3
+1.2
stress
McCas_H2_complete potassium hexahydroxoantimonate 0.125 mM
+0.3
+1.2
-0.1
+0.4
-0.3
stress
McCas_H2_complete Hydroxylamine 2.08333333333333 mM
+0.2
+1.2
+0.8
-0.1
-0.5
stress
McCas_formate_complete sulfate 125 mM
-0.2
+0.4
-0.2
+0.0
+1.7
stress
McCas_H2_complete Chloride 250 mM
+0.5
+1.2
-0.2
+0.4
+0.0
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
+0.1
+0.8
+0.3
-0.3
+1.1
stress
Formate 100 mM hypophosphite
+0.1
+2.2
+0.2
+0.0
-0.5
stress
McCas_H2_complete silver chloride 0.5 mM
+0.3
+0.8
-0.2
-0.3
+1.7
stress
McCas_formate_complete Magnesium chloride 250 mM
-0.1
+0.3
+0.3
+0.3
+1.4
stress
McCas_H2_complete Rifampicin 0.5 mM
+0.2
+1.4
-0.1
+0.4
+0.3
stress
McCas_H2_complete Fluorophosphate 62.5 mM
+0.3
+0.2
+0.8
+0.2
+0.8
stress
McCas_H2_complete Phenazine ethosulfate 0.1 mM
+0.4
+0.9
+0.5
+0.2
+0.4
stress
McCas_H2_complete sodium bromide 250 mM
+0.2
+0.5
+0.6
+0.4
+0.8
nitrogen source
H2 N-free with 10mM Gly-Glu
-0.0
+0.6
+0.6
+0.4
+0.8
stress
McCas_H2_complete Antimycin A 0.01 mM
+0.2
+0.9
+0.2
+0.6
+0.5
stress
McCas_H2_complete Econazole nitrate salt 0.02 mM
+0.0
+0.7
+0.7
+0.2
+0.8
stress
Formate 200 mM hypophosphite
-0.1
+2.2
+0.0
+0.1
+0.3
nutrient t2
H2 deepwell acetate FREE
+0.1
+0.9
+0.6
-0.4
+1.3
stress
McCas_H2_complete metavanadate 4.54545454545455 mM
+0.0
+0.9
+1.1
+0.6
+0.1
no stress control
McCas_H2_complete no stress control
+0.4
+1.0
+0.5
+0.4
+0.6
stress
McCas_H2_complete Irgasan 0.025 mM
+0.1
+0.8
+0.3
+0.2
+1.9
stress
McCas_H2_complete Cesium chloride 41.6666666666667 mM
+0.3
+0.5
+0.5
+0.3
+1.9
stress
McCas_H2_complete sodium bromide 250 mM
+0.2
+0.9
+0.8
+0.5
+1.2
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