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Fitness for 5 genes in
Methanococcus maripaludis S2
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500 nt
MMP_RS01525 and MMP_RS01530 are separated by 150 nucleotides
MMP_RS01530 and MMP_RS01535 are separated by 134 nucleotides
MMP_RS01535 and MMP_RS01540 are separated by 9 nucleotides
MMP_RS01540 and MMP_RS01545 are separated by 5 nucleotides
MMP_RS01525: MMP_RS01525 - nucleoside-diphosphate kinase, at 284,066 to 284,485
_RS01525
MMP_RS01530: MMP_RS01530 - translation initiation factor IF-2, at 284,636 to 286,441
_RS01530
MMP_RS01535: MMP_RS01535 - DHH family phosphoesterase, at 286,576 to 288,036
_RS01535
MMP_RS01540: MMP_RS01540 - DUF504 domain-containing protein, at 288,046 to 288,276
_RS01540
MMP_RS01545: MMP_RS01545 - CBS domain-containing protein, at 288,282 to 289,076
_RS01545
Group
Condition
MMP
_RS01525
MMP
_RS01530
MMP
_RS01535
MMP
_RS01540
MMP
_RS01545
nutrient t2
H2 deepwell acetate and casamino FREE
-0.5
N.D.
N.D.
-2.0
-6.3
nutrient t2
H2 deepwell acetate and casamino FREE
-0.6
N.D.
N.D.
-1.8
-6.2
nutrient t2
H2 deepwell autotrophic conditions
-0.5
N.D.
N.D.
-1.6
-6.2
stress
McCas_H2_complete Benzethonium chloride 0.003125 mM
-1.6
N.D.
N.D.
+0.5
-6.7
nutrient t2
H2 deepwell acetate and casamino FREE
-2.5
N.D.
N.D.
-3.3
-1.9
stress
McCas_H2_complete Phenazine ethosulfate 0.1 mM
+0.3
N.D.
N.D.
-0.8
-7.1
stress
McCas_H2_complete Nitrofurantoin 0.1 mM
-0.0
N.D.
N.D.
-0.6
-7.0
stress
McCas_H2_complete silver chloride 0.5 mM
+0.5
N.D.
N.D.
-1.1
-6.8
nutrient t2
H2 deepwell autotrophic conditions
-0.4
N.D.
N.D.
-1.3
-5.4
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
+2.0
N.D.
N.D.
-2.7
-6.3
stress
McCas_H2_complete Cesium chloride 41.6666666666667 mM
-0.6
N.D.
N.D.
-0.4
-5.9
nutrient t2
H2 deepwell vitamin and casamino FREE
-0.1
N.D.
N.D.
-0.6
-6.2
nitrogen source
H2 N-free with 10mM L-Lysine
+0.1
N.D.
N.D.
-1.1
-5.8
stress
McCas_H2_complete molybdate 45.4545454545455 mM
-0.3
N.D.
N.D.
-1.1
-5.3
nutrient t2
H2 deepwell acetate and vitamin FREE
+0.2
N.D.
N.D.
-0.6
-6.1
stress
McCas_H2_complete gold (III) chloride 0.0357142857142857 mM
+0.2
N.D.
N.D.
-1.4
-5.4
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
+0.5
N.D.
N.D.
-0.7
-6.3
nutrient t2
Formate deepwell autotrophic conditions
+0.7
N.D.
N.D.
-0.1
-6.4
nutrient t2
Formate deepwell autotrophic conditions
+0.7
N.D.
N.D.
+0.0
-6.3
nutrient t1
Formate deepwell casamino FREE
+0.7
N.D.
N.D.
+0.2
-6.5
nutrient t2
Formate deepwell acetate and casamino FREE
+0.8
N.D.
N.D.
+0.1
-6.5
nutrient t2
Formate deepwell vitamin and casamino FREE
+0.6
N.D.
N.D.
+0.3
-6.4
stress
McCas_H2_complete Chloride 250 mM
+0.9
N.D.
N.D.
+0.5
-6.4
nutrient t2
H2 deepwell autotrophic conditions
+1.0
N.D.
N.D.
-1.0
-5.0
nitrogen source
H2 N-free with 10mM Gly-D-Asp
+0.8
N.D.
N.D.
-1.2
-4.6
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
+2.0
N.D.
N.D.
-0.2
-6.0
stress
McCas_H2_complete metronidazole 0.000833333333333333
+1.5
N.D.
N.D.
-0.7
-4.3
stress
McCas_formate_complete NO 0.025 mM
+0.3
N.D.
N.D.
+1.7
-4.8
stress
McCas_formate_complete gold (III) chloride 0.0714285714285714 mM
+1.3
N.D.
N.D.
+1.8
-4.3
stress
McCas_H2_complete metavanadate 4.54545454545455 mM
+1.3
N.D.
N.D.
+2.9
-5.3
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