Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS01470 and MMP_RS01475 are separated by 18 nucleotidesMMP_RS01475 and MMP_RS01480 are separated by 211 nucleotidesMMP_RS01480 and MMP_RS01485 are separated by 251 nucleotidesMMP_RS01485 and MMP_RS01490 are separated by 24 nucleotides MMP_RS01470: MMP_RS01470 - ATP-binding cassette domain-containing protein, at 271,467 to 272,258 _RS01470 MMP_RS01475: MMP_RS01475 - phosphosulfolactate synthase, at 272,277 to 273,032 _RS01475 MMP_RS01480: MMP_RS01480 - hydrogenase expression/formation protein HypE, at 273,244 to 274,248 _RS01480 MMP_RS01485: MMP_RS01485 - right-handed parallel beta-helix repeat-containing protein, at 274,500 to 277,178 _RS01485 MMP_RS01490: MMP_RS01490 - tetratricopeptide repeat protein, at 277,203 to 278,237 _RS01490
Group Condition MMP_RS01470 MMP_RS01475 MMP_RS01480 MMP_RS01485 MMP_RS01490
nutrient t2 Formate deepwell autotrophic conditions +0.1 -4.1 N.D. +0.3 -0.1
nutrient t2 Formate deepwell acetate and casamino FREE +0.0 -4.0 N.D. +0.2 +0.0
nutrient t2 Formate deepwell autotrophic conditions +0.2 -4.0 N.D. +0.2 -0.0
nutrient t2 Formate deepwell acetate and casamino FREE +0.1 -3.5 N.D. +0.1 +0.0
nutrient t2 Formate deepwell autotrophic conditions +0.5 -4.2 N.D. +0.3 +0.1
nutrient t2 Formate deepwell acetate and casamino FREE +0.3 -3.6 N.D. +0.2 -0.2
nutrient t2 Formate deepwell acetate FREE -0.3 -2.5 N.D. +0.1 +0.1
nutrient t2 Formate deepwell acetate and vitamin FREE -0.2 -2.2 N.D. -0.0 -0.1
nutrient t1 Formate deepwell casamino FREE -0.3 -2.1 N.D. +0.0 -0.1
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -0.1 -2.2 N.D. +0.0 -0.1
nutrient t2 Formate deepwell acetate FREE +0.1 -2.6 N.D. -0.0 +0.1
nutrient t2 Formate deepwell acetate and vitamin FREE +0.3 -2.4 N.D. +0.1 -0.1
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE +0.1 -2.4 N.D. +0.1 -0.0
nutrient t2 Formate deepwell acetate FREE -0.0 -2.4 N.D. +0.3 +0.1
stress Formate with hypochlorite 5 mM -0.2 -2.1 N.D. +0.2 +0.0
nutrient t1 Formate deepwell casamino FREE +0.2 -2.3 N.D. +0.1 -0.1
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -0.5 -1.9 N.D. +0.1 +0.3
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -0.2 -2.3 N.D. -0.0 +0.6
nutrient t1 Formate deepwell casamino FREE +0.3 -2.1 N.D. +0.1 +0.0
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -0.4 -1.7 N.D. +0.3 +0.1
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -0.4 -2.1 N.D. +0.2 +0.8
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -0.2 -2.0 N.D. +0.1 +0.6
nutrient t1 Formate deepwell acetate and casamino FREE +0.3 -1.9 N.D. +0.2 +0.1
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -0.2 -1.5 N.D. +0.1 +0.9
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -0.7 -1.3 N.D. +0.0 +1.3
stress H2 McCas with 0.1 mM sulfite +0.7 -1.5 N.D. +0.2 +0.2
stress H2 McCas with 10 mM thiosulfate +0.7 -1.3 N.D. +0.1 +0.4
nutrient t1 Mc formate, casamino free, with 10mM L-Threonine -0.8 +1.0 N.D. +0.3 -0.5
stress McCas_formate_complete metavanadate 4.54545454545455 mM +0.1 -0.2 N.D. +2.3 -0.4
stress McCas_H2_complete Spiramycin 0.1 mM +0.6 +0.7 N.D. +1.1 +0.2
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