Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS01345 and MMP_RS01350 overlap by 1 nucleotidesMMP_RS01350 and MMP_RS01355 are separated by 54 nucleotidesMMP_RS01355 and MMP_RS01360 are separated by 29 nucleotidesMMP_RS01360 and MMP_RS01365 are separated by 98 nucleotides MMP_RS01345: MMP_RS01345 - rRNA maturation protein, at 250,463 to 250,957 _RS01345 MMP_RS01350: MMP_RS01350 - DNA-directed RNA polymerase subunit P, at 250,957 to 251,097 _RS01350 MMP_RS01355: MMP_RS01355 - 50S ribosomal protein L37Ae, at 251,152 to 251,442 _RS01355 MMP_RS01360: MMP_RS01360 - ribosome assembly factor SBDS, at 251,472 to 252,176 _RS01360 MMP_RS01365: MMP_RS01365 - archaeal proteasome endopeptidase complex subunit alpha, at 252,275 to 253,054 _RS01365
Group Condition MMP_RS01345 MMP_RS01350 MMP_RS01355 MMP_RS01360 MMP_RS01365
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations N.D. N.D. N.D. N.D. -9.3
stress McCas_formate_complete Rifampicin 0.5 mM N.D. N.D. N.D. N.D. -7.5
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations N.D. N.D. N.D. N.D. -5.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations N.D. N.D. N.D. N.D. -4.9
no stress control McCas_H2_complete no stress control N.D. N.D. N.D. N.D. -4.8
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. N.D. N.D. N.D. -3.7
stress H2 50 mM hypophosphite N.D. N.D. N.D. N.D. -3.4
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. N.D. N.D. N.D. -3.3
stress H2 McCas with 40 minute oxygen exposure N.D. N.D. N.D. N.D. -3.2
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 N.D. N.D. N.D. N.D. -3.2
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE N.D. N.D. N.D. N.D. -3.2
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 N.D. N.D. N.D. N.D. -3.1
stress McCas_H2_complete sodium bromide 250 mM N.D. N.D. N.D. N.D. -3.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations N.D. N.D. N.D. N.D. -3.1
stress McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM N.D. N.D. N.D. N.D. -3.0
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. N.D. N.D. N.D. -3.0
stress H2 McCas with 40 minute oxygen exposure N.D. N.D. N.D. N.D. -2.9
stress McCas_H2_complete Calcium Chloride Dihydrate 83.3333333333333 mM N.D. N.D. N.D. N.D. -2.9
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. N.D. N.D. N.D. -2.9
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 N.D. N.D. N.D. N.D. -2.7
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE N.D. N.D. N.D. N.D. -2.7
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 10 generations N.D. N.D. N.D. N.D. -2.7
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 N.D. N.D. N.D. N.D. -2.7
no stress control McCas_H2_complete no stress control N.D. N.D. N.D. N.D. -2.7
stress McCas_formate_complete Rifampicin 0.5 mM N.D. N.D. N.D. N.D. -2.7
nitrogen source H2 N-free with 10mM L-Alanine N.D. N.D. N.D. N.D. -2.6
stress McCas_H2_complete Benzethonium chloride 0.00625 mM N.D. N.D. N.D. N.D. +2.7
nitrogen source H2 N-free with 10mM Urea N.D. N.D. N.D. N.D. +5.2
nitrogen source H2 N-free with 10mM L-tyrosine N.D. N.D. N.D. N.D. +5.6
nitrogen source H2 N-free with 10mM L-tyrosine N.D. N.D. N.D. N.D. +6.4
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