Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS01240 and MMP_RS01245 are separated by 131 nucleotidesMMP_RS01245 and MMP_RS01250 are separated by 230 nucleotidesMMP_RS01250 and MMP_RS01255 are separated by 33 nucleotidesMMP_RS01255 and MMP_RS01260 are separated by 40 nucleotides MMP_RS01240: MMP_RS01240 - 7-cyano-7-deazaguanine synthase QueC, at 233,476 to 234,177 _RS01240 MMP_RS01245: MMP_RS01245 - anaerobic ribonucleoside-triphosphate reductase, at 234,309 to 236,621 _RS01245 MMP_RS01250: MMP_RS01250 - tRNA (guanine(26)-N(2))-dimethyltransferase, at 236,852 to 237,973 _RS01250 MMP_RS01255: MMP_RS01255 - amino acid ABC transporter ATP-binding protein, at 238,007 to 238,738 _RS01255 MMP_RS01260: MMP_RS01260 - HDIG domain-containing protein, at 238,779 to 239,465 _RS01260
Group Condition MMP_RS01240 MMP_RS01245 MMP_RS01250 MMP_RS01255 MMP_RS01260
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations -1.8 N.D. -4.9 +0.2 +0.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations -1.7 N.D. -4.7 +0.1 +0.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations -1.4 N.D. -4.6 +0.2 +0.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations -1.4 N.D. -3.7 +0.2 -0.1
nutrient t2 H2 deepwell autotrophic conditions -2.8 N.D. -1.0 +0.5 -1.4
nutrient t2 H2 deepwell acetate and casamino FREE -3.3 N.D. -0.2 +0.3 -1.4
nutrient t2 H2 deepwell autotrophic conditions -1.8 N.D. -1.5 +0.3 -1.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations -1.1 N.D. -3.2 +0.1 -0.0
nutrient t2 H2 deepwell acetate and vitamin FREE -1.8 N.D. -1.0 -0.4 -1.0
stress H2 McCas with 10 mM (NH4)2S -2.7 N.D. -1.0 -0.1 -0.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations -1.0 N.D. -2.8 +0.2 -0.5
nutrient t2 H2 deepwell acetate and casamino FREE -1.7 N.D. -1.7 +0.2 -0.9
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE +0.1 N.D. -4.3 +0.0 +0.4
nutrient t1 Mc formate, casamino free, with 10mM L-Ornithine -1.1 N.D. -1.5 -0.8 -0.5
nutrient t1 Mc formate, casamino free, with 10mM L-Proline -0.8 N.D. -1.6 -0.7 -0.7
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -0.1 N.D. -3.6 -0.0 +0.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations -0.1 N.D. -2.1 +0.4 -1.4
stress McCas_formate_complete Antimycin A 0.01 mM +0.6 N.D. -2.4 -0.9 -0.4
nutrient t2 H2 deepwell autotrophic conditions -1.4 N.D. -1.3 +0.5 -0.9
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -0.4 N.D. -3.4 +0.1 +0.7
stress Formate 100 mM hypophosphite +0.7 N.D. -1.8 +0.6 -2.1
nutrient t2 H2 deepwell acetate FREE -1.7 N.D. -0.8 -0.8 +0.6
stress McCas_formate_complete NO 0.025 mM +1.0 N.D. -2.8 -0.0 -0.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations +1.7 N.D. -1.3 +0.3 -2.7
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations +0.7 N.D. -1.8 +0.7 -1.5
nutrient t2 Formate deepwell acetate FREE -0.1 N.D. -2.6 +0.2 +0.8
nitrogen source H2 N-free with 10mM Uridine -1.2 N.D. -1.5 +0.6 +0.5
stress McCas_H2_complete Irgasan 0.025 mM -0.9 N.D. +1.8 -0.9 +0.1
stress McCas_H2_complete metronidazole 0.000833333333333333 +2.5 N.D. +1.0 -1.3 -0.0
stress McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM +2.0 N.D. +0.7 -0.7 +0.4
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