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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS01145 and MMP_RS01150 are separated by 155 nucleotides
MMP_RS01150 and MMP_RS01155 are separated by 15 nucleotides
MMP_RS01155 and MMP_RS01160 are separated by 137 nucleotides
MMP_RS01160 and MMP_RS01165 are separated by 95 nucleotides
MMP_RS01145: MMP_RS01145 - ABC transporter ATP-binding protein, at 214,016 to 215,158
_RS01145
MMP_RS01150: MMP_RS01150 - aldo/keto reductase, at 215,314 to 216,543
_RS01150
MMP_RS01155: MMP_RS01155 - XRE family transcriptional regulator, at 216,559 to 217,113
_RS01155
MMP_RS01160: MMP_RS01160 - DMT family transporter, at 217,251 to 218,150
_RS01160
MMP_RS01165: MMP_RS01165 - DUF434 domain-containing protein, at 218,246 to 218,914
_RS01165
Group
Condition
MMP
_RS01145
MMP
_RS01150
MMP
_RS01155
MMP
_RS01160
MMP
_RS01165
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
-2.0
-5.7
-0.9
-0.0
+0.6
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations
-1.2
-3.2
-0.3
+0.0
+0.4
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 10 generations
-1.0
-2.1
-0.3
-0.2
+0.2
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
-0.7
-2.1
-0.3
+0.3
+0.3
nitrogen source
H2 N-free with 5mM Inosine
+0.5
-0.3
-1.5
+0.6
+0.5
nitrogen source
H2 N-free with 10mM NAG
+1.3
+0.3
-0.9
+0.3
-0.9
nitrogen source
H2 N-free with 10mM L-Carnitine
+1.6
+0.3
-1.3
+0.1
-0.3
nitrogen source
H2 N-free with 10mM L-Proline
+0.7
+0.4
-1.5
+0.6
+0.2
nitrogen source
H2 N-free with 10mM Gly-D-Asp
+2.0
-0.6
-0.5
-0.1
-0.3
nitrogen source
N2 fixation, H2 media
+0.9
+0.7
-1.4
+0.6
-0.1
nitrogen source
H2 N-free with 5mM Inosine
+1.3
-0.2
-1.1
+0.2
+0.4
nitrogen source
H2 N-free with 10mM L-Tryptophan
+1.0
+0.5
-1.1
+0.3
+0.0
nitrogen source
H2 N-free with 10mM Gly-D-Asp
+2.2
-0.1
-1.1
+0.1
-0.2
nitrogen source
H2 N-free with 10mM L-tyrosine
+1.6
-0.2
-0.8
+0.5
-0.1
nitrogen source
H2 N-free with 10mM L-Arginine
+1.7
+0.0
-1.2
+0.6
-0.0
nitrogen source
H2 N-free with 10mM L-Glutamic
+2.2
+0.1
-1.3
+0.3
-0.2
nitrogen source
H2 N-free with 10mM Thymidine
+1.9
+0.4
-1.4
+0.6
-0.2
nitrogen source
H2 N-free with 10mM Cytidine
+0.3
+0.6
-1.0
+0.6
+0.7
nitrogen source
H2 N-free with 10mM Glycine
+2.0
+0.1
-1.5
+0.5
+0.2
nitrogen source
H2 N-free with 10mM L-Glutamic
+2.2
+0.5
-1.4
+0.5
-0.5
nitrogen source
H2 N-free with 10mM Thymidine
+1.8
-0.2
-1.1
+0.6
+0.2
stress
McCas_H2_complete potassium hexahydroxoantimonate 0.125 mM
+0.6
+0.8
+1.0
-0.0
-0.7
stress
McCas_formate_complete Antimycin A 0.01 mM
+0.4
+0.8
+1.0
+0.4
-0.7
nitrogen source
H2 N-free with 10mM Parabanic Acid
+2.0
+0.4
-0.7
+0.3
-0.1
nitrogen source
H2 N-free with 10mM L-tyrosine
+1.2
+0.3
-0.4
+0.3
+0.9
stress
Formate 200 mM hypophosphite
-0.1
-0.5
-0.0
-0.0
+3.2
nitrogen source
H2 N-free with 10mM L-Threonine
+3.0
+0.1
-1.6
+0.7
+0.5
nitrogen source
H2 N-free with 10mM L-Threonine
+3.6
+0.1
-1.7
+0.4
+0.3
stress
Formate 100 mM hypophosphite
+0.1
+0.6
+1.0
-0.1
+1.7
stress
Formate 100 mM hypophosphite
+0.3
+0.2
+1.5
+0.1
+1.6
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