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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS01125 and MMP_RS01130 are separated by 69 nucleotides
MMP_RS01130 and MMP_RS01135 are separated by 526 nucleotides
MMP_RS01135 and MMP_RS01140 are separated by 9 nucleotides
MMP_RS01140 and MMP_RS01145 are separated by 9 nucleotides
MMP_RS01125: MMP_RS01125 - thioredoxin family protein, at 211,168 to 211,401
_RS01125
MMP_RS01130: MMP_RS01130 - flavoprotein, at 211,471 to 212,001
_RS01130
MMP_RS01135: MMP_RS01135 - molybdate ABC transporter substrate-binding protein, at 212,528 to 213,331
_RS01135
MMP_RS01140: MMP_RS01140 - molybdate ABC transporter permease subunit, at 213,341 to 214,006
_RS01140
MMP_RS01145: MMP_RS01145 - ABC transporter ATP-binding protein, at 214,016 to 215,158
_RS01145
Group
Condition
MMP
_RS01125
MMP
_RS01130
MMP
_RS01135
MMP
_RS01140
MMP
_RS01145
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
+0.5
-0.2
-0.3
-2.3
-2.0
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations
+0.4
+0.1
-0.1
-1.7
-1.2
stress
McCas_H2_complete Chlorate 250 mM
-0.4
+0.6
+0.6
-1.3
+0.5
nitrogen source
H2 N-free with 10mM B-Alanine
-0.3
+0.2
+1.0
+0.7
+1.2
nutrient t2
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE
+1.3
-0.3
+0.9
+0.8
+0.1
nitrogen source
H2 N-free with 10mM L-tyrosine
-0.5
+0.3
+0.6
+1.4
+1.2
nitrogen source
H2 N-free with 2mM Adenine
+0.0
+0.3
+0.9
+0.6
+1.2
nitrogen source
H2 N-free with 10mM NAG
-0.2
-0.1
+1.4
+0.5
+1.3
nitrogen source
H2 N-free with 2mM Adenine
+0.1
+0.4
+0.9
+0.5
+1.2
nitrogen source
H2 N-free with 10mM L-Tryptophan
-0.1
+0.3
+1.5
+0.2
+1.2
nitrogen source
H2 N-free with 2mM Adenosine
+0.3
-0.2
+0.3
+2.3
+0.6
nitrogen source
H2 N-free with 10mM L-Arginine
-0.5
+0.5
+1.6
+0.4
+1.7
nitrogen source
H2 N-free with 10mM L-tyrosine
-0.9
+0.7
+0.4
+2.0
+1.6
nitrogen source
H2 N-free with 5mM Inosine
+0.6
-0.2
+1.5
+0.8
+1.3
nitrogen source
H2 N-free with 10mM L-Carnitine
-0.1
+0.2
+1.1
+1.3
+1.5
nitrogen source
H2 N-free with 10mM Gly-D-Asp
+0.2
+0.2
+1.3
+1.0
+1.5
nitrogen source
H2 N-free with 10mM Thymidine
-0.5
+0.0
+1.6
+1.3
+1.8
nitrogen source
H2 N-free with 10mM Glycine
-0.1
-0.5
+2.0
+1.0
+2.0
nitrogen source
H2 N-free with 10mM Uridine
-0.4
+0.3
+1.4
+1.6
+1.5
nitrogen source
H2 N-free with 10mM Thymidine
-0.3
+0.3
+1.6
+1.0
+1.9
nitrogen source
H2 N-free with 10mM L-Carnitine
+0.1
+0.1
+1.4
+1.5
+1.6
nitrogen source
H2 N-free with 10mM Parabanic Acid
+0.3
+0.0
+1.7
+1.4
+2.0
nitrogen source
H2 N-free with 10mM Parabanic Acid
+0.3
+0.2
+1.7
+1.3
+2.0
nitrogen source
H2 N-free with 10mM L-Glutamic
-0.3
-0.0
+2.3
+1.2
+2.2
nitrogen source
H2 N-free with 10mM Uridine
-0.1
+0.3
+1.5
+2.1
+1.7
nitrogen source
H2 N-free with 10mM L-Glutamic
-0.1
+0.1
+2.0
+1.3
+2.2
nitrogen source
H2 N-free with 10mM Gly-D-Asp
+0.1
+0.3
+1.9
+1.7
+2.0
nitrogen source
H2 N-free with 10mM Gly-D-Asp
+0.0
+0.2
+2.0
+1.6
+2.2
nitrogen source
H2 N-free with 10mM L-Threonine
-0.1
+0.2
+3.3
+1.9
+3.6
nitrogen source
H2 N-free with 10mM L-Threonine
+0.0
-0.1
+3.0
+3.2
+3.0
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