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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS01050 and MMP_RS01055 are separated by 334 nucleotides
MMP_RS01055 and MMP_RS01060 are separated by 236 nucleotides
MMP_RS01060 and MMP_RS01065 are separated by 199 nucleotides
MMP_RS01065 and MMP_RS01070 are separated by 343 nucleotides
MMP_RS01050: MMP_RS01050 - tRNA-Leu, at 197,613 to 197,697
_RS01050
MMP_RS01055: MMP_RS01055 - hypothetical protein, at 198,032 to 198,409
_RS01055
MMP_RS01060: MMP_RS01060 - calcium/sodium antiporter, at 198,646 to 199,608
_RS01060
MMP_RS01065: MMP_RS01065 - alpha/beta hydrolase, at 199,808 to 200,512
_RS01065
MMP_RS01070: MMP_RS01070 - hypothetical protein, at 200,856 to 201,914
_RS01070
Group
Condition
MMP
_RS01050
MMP
_RS01055
MMP
_RS01060
MMP
_RS01065
MMP
_RS01070
nitrogen source
Formate N-free with 2mM Adenosine
N.D.
-1.6
+0.1
+0.2
+0.0
stress
McCas_formate_complete nitrate 35.7142857142857 mM
N.D.
+1.1
-0.3
-0.6
-0.2
stress
McCas_formate_complete 3-nitroxypropanol 0.00833333333333333 mM
N.D.
+1.3
+0.1
-0.6
+0.0
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
N.D.
+1.4
-0.1
-0.4
+0.2
nutrient t2
H2 deepwell vitamin FREE
N.D.
+1.5
-0.1
-0.1
+0.3
stress
McCas_H2_complete sulfate 125 mM
N.D.
+1.5
+0.3
+0.1
-0.1
stress
McCas_H2_complete Fluorophosphate 62.5 mM
N.D.
+0.5
+0.7
+0.6
-0.1
nitrogen source
H2 N-free with 10mM L-Methionine
N.D.
+0.9
+0.3
+0.4
+0.1
stress
McCas_H2_complete Sulfaquinoxaline 0.1 mM
N.D.
+1.4
+0.2
+0.3
-0.1
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations
N.D.
+0.9
+0.3
+0.3
+0.3
stress
McCas_H2_complete phosphate monobasic 83.3333333333333 mM
N.D.
+1.0
+0.2
+0.6
+0.0
no stress control
McCas_H2_complete no stress control
N.D.
+0.8
+0.1
+0.8
+0.2
stress
McCas_H2_complete Nitrofurantoin 0.1 mM
N.D.
+1.0
+0.6
+0.2
+0.1
stress
McCas_H2_complete sodium nitrite 1.04166666666667 mM
N.D.
+1.0
+0.4
+0.3
+0.2
no stress control
McCas_H2_complete no stress control
N.D.
+1.0
+0.3
+0.5
+0.1
nitrogen source
H2 N-free with 10mM L-Methionine
N.D.
+0.8
+0.5
+0.5
+0.1
stress
McCas_H2_complete rubidium chloride 125 mM
N.D.
+1.6
+0.3
+0.1
+0.0
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
N.D.
+1.5
+0.1
+0.3
+0.0
nitrogen source
H2 N-free with 10mM L-Leucine
N.D.
+0.9
+0.6
+0.4
+0.2
nitrogen source
H2 N-free with 10mM L-Tryptophan
N.D.
+0.9
+0.7
+0.2
+0.2
stress
McCas_H2_complete Hydroxylamine 2.08333333333333 mM
N.D.
+1.4
+0.4
+0.2
+0.1
stress
H2 McCas with 40 minute oxygen exposure
N.D.
+1.0
+0.6
+0.4
+0.1
stress
McCas_H2_complete Cesium chloride 41.6666666666667 mM
N.D.
+1.3
+0.8
+0.0
+0.2
stress
McCas_H2_complete silver chloride 0.5 mM
N.D.
+1.2
+0.4
+0.5
+0.2
nutrient t2
H2 deepwell acetate FREE
N.D.
+1.5
+0.3
+0.4
+0.1
stress
McCas_H2_complete Chlorpromazine 0.0333333333333333 mM
N.D.
+1.6
+0.4
+0.2
+0.2
nitrogen source
H2 N-free with 5mM Inosine
N.D.
+1.2
+0.3
+0.3
+0.6
no stress control
McCas_H2_complete no stress control
N.D.
+1.5
+0.5
+0.4
+0.4
no stress control
McCas_H2_complete no stress control
N.D.
+2.2
+0.2
+0.7
+0.2
stress
McCas_H2_complete Chlorate 250 mM
N.D.
+2.4
+1.0
+0.4
+0.1
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