Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS00995 and MMP_RS01000 are separated by 9 nucleotidesMMP_RS01000 and MMP_RS01005 are separated by 174 nucleotidesMMP_RS01005 and MMP_RS01010 are separated by 128 nucleotidesMMP_RS01010 and MMP_RS01015 are separated by 250 nucleotides MMP_RS00995: MMP_RS00995 - phosphoribosylformylglycinamidine synthase I, at 186,678 to 187,487 _RS00995 MMP_RS01000: MMP_RS01000 - AIR synthase related protein, at 187,497 to 190,466 _RS01000 MMP_RS01005: MMP_RS01005 - riboflavin synthase, at 190,641 to 191,111 _RS01005 MMP_RS01010: MMP_RS01010 - DUF4352 domain-containing protein, at 191,240 to 191,773 _RS01010 MMP_RS01015: MMP_RS01015 - hypothetical protein, at 192,024 to 192,236 _RS01015
Group Condition MMP_RS00995 MMP_RS01000 MMP_RS01005 MMP_RS01010 MMP_RS01015
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 10 generations N.D. N.D. -5.6 -0.4 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations N.D. N.D. -6.1 +0.2 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 10 generations N.D. N.D. -5.8 -0.0 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations N.D. N.D. -5.8 -0.0 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations N.D. N.D. -5.9 +0.1 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations N.D. N.D. -5.9 +0.1 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations N.D. N.D. -5.9 +0.1 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations N.D. N.D. -5.4 -0.2 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 10 generations N.D. N.D. -5.7 +0.1 N.D.
nutrient t1 Formate deepwell casamino FREE N.D. N.D. -5.3 -0.2 N.D.
nutrient t1 Formate deepwell casamino FREE N.D. N.D. -5.3 -0.1 N.D.
nutrient t2 Formate deepwell autotrophic conditions N.D. N.D. -5.2 -0.2 N.D.
nutrient t2 Formate deepwell acetate and casamino FREE N.D. N.D. -5.4 +0.0 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 N.D. N.D. -5.6 +0.2 N.D.
nutrient t1 Formate deepwell vitamin FREE N.D. N.D. -5.3 -0.0 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations N.D. N.D. -5.0 -0.3 N.D.
nutrient t2 Formate deepwell autotrophic conditions N.D. N.D. -5.3 -0.1 N.D.
stress H2 McCas with 1 hour oxygen exposure N.D. N.D. -5.4 +0.1 N.D.
rich t2 Formate McCas deepwell complete N.D. N.D. -5.3 +0.0 N.D.
rich t2 Formate McCas deepwell complete N.D. N.D. -5.4 +0.1 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 N.D. N.D. -5.4 +0.1 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations N.D. N.D. -5.4 +0.2 N.D.
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 N.D. N.D. -5.4 +0.2 N.D.
nutrient t1 Formate deepwell vitamin FREE N.D. N.D. -5.3 +0.2 N.D.
nutrient t2 H2 deepwell casamino FREE N.D. N.D. -5.2 +0.2 N.D.
nutrient t2 H2 deepwell vitamin and casamino FREE N.D. N.D. -5.2 +0.2 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. N.D. -5.2 +0.2 N.D.
nutrient t2 H2 deepwell acetate and vitamin FREE N.D. N.D. -5.0 +0.4 N.D.
nutrient t2 H2 deepwell acetate FREE N.D. N.D. -4.9 +0.6 N.D.
stress McCas_H2_complete Hydroxylamine 1.04166666666667 mM N.D. N.D. -4.7 +0.7 N.D.
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