Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS00985 and MMP_RS00990 are separated by 112 nucleotidesMMP_RS00990 and MMP_RS00995 are separated by 135 nucleotidesMMP_RS00995 and MMP_RS01000 are separated by 9 nucleotidesMMP_RS01000 and MMP_RS01005 are separated by 174 nucleotides MMP_RS00985: MMP_RS00985 - CDC48 family AAA ATPase, at 183,704 to 186,070 _RS00985 MMP_RS00990: MMP_RS00990 - hypothetical protein, at 186,183 to 186,542 _RS00990 MMP_RS00995: MMP_RS00995 - phosphoribosylformylglycinamidine synthase I, at 186,678 to 187,487 _RS00995 MMP_RS01000: MMP_RS01000 - AIR synthase related protein, at 187,497 to 190,466 _RS01000 MMP_RS01005: MMP_RS01005 - riboflavin synthase, at 190,641 to 191,111 _RS01005
Group Condition MMP_RS00985 MMP_RS00990 MMP_RS00995 MMP_RS01000 MMP_RS01005
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations -8.2 -0.2 N.D. N.D. -6.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations -8.7 +0.1 N.D. N.D. -5.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations -8.6 +0.0 N.D. N.D. -5.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations -7.9 -0.1 N.D. N.D. -5.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations -7.8 -0.1 N.D. N.D. -5.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations -8.6 +0.6 N.D. N.D. -5.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations -7.0 -0.2 N.D. N.D. -5.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations -5.9 -0.2 N.D. N.D. -5.8
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations -8.0 +1.2 N.D. N.D. -5.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 10 generations -4.8 +0.1 N.D. N.D. -5.7
nutrient t2 H2 deepwell acetate and vitamin FREE -4.7 +0.5 N.D. N.D. -4.9
nutrient t2 Formate deepwell acetate and casamino FREE -3.4 -0.2 N.D. N.D. -5.4
nutrient t2 Formate deepwell autotrophic conditions -3.3 -0.5 N.D. N.D. -5.3
rich t2 H2 McCas deepwell complete -4.4 +0.4 N.D. N.D. -4.8
nutrient t2 Formate deepwell autotrophic conditions -3.0 -0.5 N.D. N.D. -5.2
nutrient t2 Formate deepwell acetate and casamino FREE -4.4 -0.0 N.D. N.D. -4.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 10 generations -3.5 +0.7 N.D. N.D. -5.6
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -2.9 +0.0 N.D. N.D. -5.6
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -3.0 +0.1 N.D. N.D. -5.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 10 generations -2.6 +0.2 N.D. N.D. -5.8
nutrient t2 H2 deepwell acetate FREE -4.3 +1.0 N.D. N.D. -4.9
nutrient t2 H2 deepwell acetate and vitamin FREE -3.7 +0.6 N.D. N.D. -5.0
nutrient t2 H2 deepwell acetate FREE -4.4 +0.8 N.D. N.D. -4.3
nutrient t2 H2 deepwell acetate FREE -3.2 +0.4 N.D. N.D. -5.1
nutrient t2 H2 deepwell vitamin FREE -3.6 +0.6 N.D. N.D. -4.8
no stress control McCas_H2_complete no stress control -3.1 +0.5 N.D. N.D. -4.9
nutrient t2 H2 deepwell casamino FREE -3.1 +0.9 N.D. N.D. -5.2
nutrient t2 H2 deepwell acetate and vitamin FREE -3.2 +0.8 N.D. N.D. -4.9
stress H2 McCas with 1 hour oxygen exposure -2.1 +1.0 N.D. N.D. -5.4
stress H2 McCas with 40 minute oxygen exposure -2.6 +0.9 N.D. N.D. -4.8
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