Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS00975 and MMP_RS00980 are separated by 142 nucleotidesMMP_RS00980 and MMP_RS00985 are separated by 24 nucleotidesMMP_RS00985 and MMP_RS00990 are separated by 112 nucleotidesMMP_RS00990 and MMP_RS00995 are separated by 135 nucleotides MMP_RS00975: MMP_RS00975 - HD domain-containing protein, at 181,696 to 183,072 _RS00975 MMP_RS00980: MMP_RS00980 - hypothetical protein, at 183,215 to 183,679 _RS00980 MMP_RS00985: MMP_RS00985 - CDC48 family AAA ATPase, at 183,704 to 186,070 _RS00985 MMP_RS00990: MMP_RS00990 - hypothetical protein, at 186,183 to 186,542 _RS00990 MMP_RS00995: MMP_RS00995 - phosphoribosylformylglycinamidine synthase I, at 186,678 to 187,487 _RS00995
Group Condition MMP_RS00975 MMP_RS00980 MMP_RS00985 MMP_RS00990 MMP_RS00995
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations -0.6 +0.1 -8.2 -0.2 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations -0.0 -0.0 -8.7 +0.1 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations -0.2 +0.0 -7.9 -0.1 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations -0.2 +0.1 -7.8 -0.1 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations +0.7 +0.3 -8.6 +0.0 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations -0.0 -0.1 -7.0 -0.2 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations +0.9 -0.2 -8.6 +0.6 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations +0.0 -0.1 -5.9 -0.2 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations +1.3 +0.1 -8.0 +1.2 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 10 generations +0.3 -0.0 -4.8 +0.1 N.D.
nitrogen source H2 N-free with 10mM L-Valine -0.0 +0.2 -4.5 +0.3 N.D.
nutrient t2 Formate deepwell acetate and casamino FREE +0.5 -0.0 -4.4 -0.0 N.D.
nutrient t2 H2 deepwell acetate and vitamin FREE +0.1 +0.4 -4.7 +0.5 N.D.
rich t2 H2 McCas deepwell complete +0.3 +0.2 -4.4 +0.4 N.D.
nutrient t1 Mc formate, casamino free, with 10mM L-Threonine +0.5 +0.2 -3.0 -1.0 N.D.
nutrient t2 H2 deepwell acetate FREE +0.2 +0.5 -4.4 +0.8 N.D.
no stress control McCas_H2_complete no stress control +0.1 +0.4 -3.9 +0.6 N.D.
nutrient t1 Mc formate, casamino free, with 10mM L-Threonine +0.7 +0.4 -2.4 -1.4 N.D.
nutrient t2 H2 deepwell vitamin FREE +0.0 +0.5 -3.6 +0.6 N.D.
nutrient t2 H2 deepwell acetate and vitamin FREE +0.1 +0.6 -3.7 +0.6 N.D.
nutrient t2 H2 deepwell acetate FREE +0.2 +0.8 -4.3 +1.0 N.D.
nitrogen source H2 N-free with 2.5mM Cytosine +0.6 +0.2 -3.6 +0.5 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 10 generations +0.5 +0.0 -3.5 +0.7 N.D.
nitrogen source H2 N-free with 10mM Putrescine +0.4 +0.3 -3.5 +0.7 N.D.
nutrient t2 H2 deepwell acetate and vitamin FREE +0.4 +0.4 -3.2 +0.8 N.D.
nitrogen source H2 N-free with 10mM L-Glutamic +0.7 +0.3 -3.1 +0.8 N.D.
stress McCas_H2_complete Benzethonium chloride 0.003125 mM +0.4 +0.3 -2.7 +1.6 N.D.
stress McCas_H2_complete phosphate monobasic 83.3333333333333 mM +0.2 +1.3 -2.3 +0.9 N.D.
nitrogen source H2 N-free with 10mM Uridine +3.9 -0.0 -2.1 -0.8 N.D.
nitrogen source H2 N-free with 10mM Uridine +4.1 +0.2 -2.3 -0.3 N.D.
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