Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS00915 and MMP_RS00920 are separated by 60 nucleotidesMMP_RS00920 and MMP_RS00925 are separated by 47 nucleotidesMMP_RS00925 and MMP_RS00930 are separated by 90 nucleotidesMMP_RS00930 and MMP_RS00935 are separated by 9 nucleotides MMP_RS00915: MMP_RS00915 - DUF116 domain-containing protein, at 171,362 to 172,006 _RS00915 MMP_RS00920: MMP_RS00920 - TRC40/GET3/ArsA family transport-energizing ATPase, at 172,067 to 173,104 _RS00920 MMP_RS00925: MMP_RS00925 - sirohydrochlorin nickelochelatase, at 173,152 to 173,586 _RS00925 MMP_RS00930: MMP_RS00930 - ABC transporter permease, at 173,677 to 174,438 _RS00930 MMP_RS00935: MMP_RS00935 - MATE family efflux transporter, at 174,448 to 175,830 _RS00935
Group Condition MMP_RS00915 MMP_RS00920 MMP_RS00925 MMP_RS00930 MMP_RS00935
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations -8.9 N.D. N.D. -0.1 +0.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations -8.3 N.D. N.D. -0.5 +0.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations -8.4 N.D. N.D. +0.5 +0.0
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -7.6 N.D. N.D. -0.1 -0.1
nitrogen source H2 N-free with 10mM L-Glutamic -3.8 N.D. N.D. -0.6 -0.2
nitrogen source H2 N-free with 10mM L-Leucine -4.2 N.D. N.D. +0.1 -0.1
nitrogen source H2 N-free with 10mM L-Glutamic -3.8 N.D. N.D. +0.1 -0.5
nitrogen source H2 N-free with 10mM Thymidine -3.4 N.D. N.D. -0.6 +0.1
stress McCas_formate_complete Rifampicin 0.5 mM -3.6 N.D. N.D. -0.5 +0.3
nitrogen source H2 N-free with 10mM L-Arginine -3.3 N.D. N.D. -0.3 -0.0
nitrogen source H2 N-free with 10mM L-Methionine -3.5 N.D. N.D. -0.3 +0.1
nutrient t1 Mc formate, casamino free, with 10mM L-Threonine -3.2 N.D. N.D. -0.3 -0.2
stress McCas_formate_complete Polymyxin B sulfate 0.1 mM -3.4 N.D. N.D. -0.1 -0.0
nitrogen source H2 N-free with 10mM L-Methionine -3.4 N.D. N.D. -0.1 +0.1
nitrogen source H2 N-free with 10mM L-Leucine -3.5 N.D. N.D. +0.0 +0.0
nitrogen source H2 N-free with 10mM L-Carnitine -3.4 N.D. N.D. -0.1 +0.1
nitrogen source H2 N-free with 10mM Cytidine -3.6 N.D. N.D. +0.3 -0.1
nitrogen source H2 N-free with 10mM L-Valine -3.4 N.D. N.D. +0.1 +0.0
stress McCas_formate_complete Polymyxin B sulfate 0.1 mM -3.6 N.D. N.D. +0.2 +0.2
nitrogen source H2 N-free with 10mM L-Tryptophan -3.4 N.D. N.D. +0.2 -0.0
nutrient t1 Mc formate, casamino free, with 10mM L-Threonine -3.5 N.D. N.D. +0.4 -0.1
nitrogen source H2 N-free with 10mM L-Methionine -3.5 N.D. N.D. +0.1 +0.2
nitrogen source H2 N-free with 10mM L-Valine -3.4 N.D. N.D. +0.2 +0.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 10 generations -3.2 N.D. N.D. -0.2 +0.4
no stress control McCas_H2_complete no stress control -3.3 N.D. N.D. +0.0 +0.4
nitrogen source H2 N-free with 10mM Gly-D-Asp -3.1 N.D. N.D. +0.1 +0.3
stress McCas_H2_complete nitrate 35.7142857142857 mM -3.2 N.D. N.D. +0.1 +0.3
stress McCas_H2_complete Hydroxylamine 2.08333333333333 mM -3.0 N.D. N.D. +0.3 +0.3
nitrogen source H2 N-free with 5mM Inosine -2.7 N.D. N.D. +0.7 +0.1
stress H2 McCas with 10 mM thiosulfate +3.6 N.D. N.D. +0.2 +0.0
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