Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS00870 and MMP_RS00875 are separated by 49 nucleotidesMMP_RS00875 and MMP_RS00880 are separated by 236 nucleotidesMMP_RS00880 and MMP_RS00885 are separated by 229 nucleotidesMMP_RS00885 and MMP_RS00890 are separated by 25 nucleotides MMP_RS00870: MMP_RS00870 - homocitrate synthase family protein, at 163,925 to 165,085 _RS00870 MMP_RS00875: MMP_RS00875 - methanogenesis marker 3 protein, at 165,135 to 166,640 _RS00875 MMP_RS00880: MMP_RS00880 - ribosome assembly RNA-binding protein YhbY, at 166,877 to 167,260 _RS00880 MMP_RS00885: MMP_RS00885 - 30S ribosomal protein S19e, at 167,490 to 167,915 _RS00885 MMP_RS00890: MMP_RS00890 - DNA-binding protein, at 167,941 to 168,300 _RS00890
Group Condition MMP_RS00870 MMP_RS00875 MMP_RS00880 MMP_RS00885 MMP_RS00890
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations N.D. N.D. -2.0 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations N.D. N.D. -1.8 N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. N.D. -1.8 N.D. N.D.
stress McCas_H2_complete Chloride 250 mM N.D. N.D. -1.7 N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. N.D. -1.7 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations N.D. N.D. -1.7 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations N.D. N.D. -1.6 N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. N.D. -1.5 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations N.D. N.D. -1.5 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations N.D. N.D. -1.3 N.D. N.D.
nutrient t2 H2 deepwell vitamin FREE N.D. N.D. -1.3 N.D. N.D.
stress McCas_H2_complete Chloride 250 mM N.D. N.D. -1.2 N.D. N.D.
nutrient t1 H2 deepwell vitamin FREE N.D. N.D. -1.2 N.D. N.D.
stress McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM N.D. N.D. -1.2 N.D. N.D.
stress McCas_H2_complete Antimycin A 0.01 mM N.D. N.D. -1.1 N.D. N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. N.D. -1.1 N.D. N.D.
stress McCas_H2_complete Zinc Pyrithione 0.0142857142857143 mM N.D. N.D. -1.1 N.D. N.D.
stress McCas_formate_complete arsenate 0.416666666666667 mM N.D. N.D. -1.1 N.D. N.D.
stress McCas_H2_complete 2-bromoethanesulfonic 0.00833333333333333 mM N.D. N.D. -1.1 N.D. N.D.
nitrogen source H2 N-free with 10mM L-Serine N.D. N.D. +1.1 N.D. N.D.
nitrogen source H2 N-free with 10mM Urea N.D. N.D. +1.1 N.D. N.D.
nitrogen source Formate N-free with 2mM Adenosine N.D. N.D. +1.1 N.D. N.D.
nitrogen source H2 N-free with 10mM NAG N.D. N.D. +1.1 N.D. N.D.
stress McCas_formate_complete Chloride 250 mM N.D. N.D. +1.1 N.D. N.D.
nitrogen source Formate N-free with 2mM Adenosine N.D. N.D. +1.1 N.D. N.D.
nitrogen source H2 N-free with 10mM Uridine N.D. N.D. +1.1 N.D. N.D.
nitrogen source H2 N-free with 10mM Uridine N.D. N.D. +1.2 N.D. N.D.
nitrogen source H2 N-free with 10mM L-tyrosine N.D. N.D. +1.2 N.D. N.D.
nitrogen source Formate N-free with 2mM Adenosine N.D. N.D. +1.3 N.D. N.D.
nitrogen source H2 N-free with 2mM Adenosine N.D. N.D. +1.3 N.D. N.D.
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