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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS00850 and MMP_RS00855 are separated by 69 nucleotides
MMP_RS00855 and MMP_RS00860 are separated by 4 nucleotides
MMP_RS00860 and MMP_RS00865 are separated by 381 nucleotides
MMP_RS00865 and MMP_RS08930 are separated by 268 nucleotides
MMP_RS00850: MMP_RS00850 - TIGR01177 family methyltransferase, at 159,965 to 161,017
_RS00850
MMP_RS00855: MMP_RS00855 - DUF367 family protein, at 161,087 to 161,602
_RS00855
MMP_RS00860: MMP_RS00860 - 50S ribosomal protein L40e, at 161,607 to 161,750
_RS00860
MMP_RS00865: MMP_RS00865 - SLC13 family permease, at 162,132 to 163,472
_RS00865
MMP_RS08930: MMP_RS08930 - hypothetical protein, at 163,741 to 163,899
_RS08930
Group
Condition
MMP
_RS00850
MMP
_RS00855
MMP
_RS00860
MMP
_RS00865
MMP
_RS08930
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
-5.0
-0.4
N.D.
-1.1
+0.9
stress
McCas_formate_complete sulfate 125 mM
-1.7
-0.3
N.D.
-0.2
-1.0
stress
McCas_formate_complete Magnesium chloride 250 mM
-1.3
-1.0
N.D.
-0.2
-0.7
stress
McCas_formate_complete nitrate 35.7142857142857 mM
-1.1
-1.0
N.D.
+0.2
-1.2
stress
Formate 100 mM hypophosphite
-2.0
-1.2
N.D.
+0.2
-0.1
stress
Formate 100 mM hypophosphite
-1.7
-1.4
N.D.
-0.1
+0.3
stress
McCas_formate_complete Spiramycin 0.1 mM
-2.6
-0.2
N.D.
+0.4
-0.3
stress
McCas_formate_complete Rifampicin 0.5 mM
-1.5
-0.3
N.D.
-1.2
+0.3
stress
McCas_formate_complete sulfate 125 mM
-1.0
-0.4
N.D.
+0.7
-1.9
stress
McCas_H2_complete silver chloride 0.5 mM
-1.2
+0.5
N.D.
+0.2
-1.3
nutrient t2
H2 deepwell autotrophic conditions
-1.8
-0.8
N.D.
-0.1
+1.0
nutrient t2
H2 deepwell casamino FREE
-1.7
-0.6
N.D.
-0.4
+1.5
rich t2
H2 McCas deepwell complete
-2.1
+0.2
N.D.
-0.3
+1.1
stress
McCas_formate_complete Fluorophosphate 62.5 mM
-0.7
-0.8
N.D.
-0.6
+1.3
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations
-1.8
-0.0
N.D.
-0.2
+1.4
stress
McCas_formate_complete Chloride 250 mM
-1.7
-0.2
N.D.
+0.3
+1.2
nitrogen source
H2 N-free with 10mM L-tyrosine
+1.4
-0.5
N.D.
+0.2
-1.3
nutrient t2
H2 deepwell acetate and casamino FREE
-1.6
-0.3
N.D.
-0.3
+2.0
nutrient t2
H2 deepwell vitamin and casamino FREE
-1.6
-0.2
N.D.
+0.5
+1.2
stress
McCas_H2_complete sulfate 125 mM
-0.7
+1.4
N.D.
+0.6
-0.5
nitrogen source
H2 N-free with 10mM Cytidine
-0.7
+1.0
N.D.
-0.6
+1.2
stress
McCas_H2_complete Hydroxylamine 2.08333333333333 mM
-1.0
+1.0
N.D.
-0.3
+1.5
nutrient t2
H2 deepwell acetate and vitamin FREE
-1.6
+0.6
N.D.
+1.1
+1.1
stress
McCas_H2_complete Lithium chloride 250 mM
-0.8
+0.9
N.D.
-0.2
+2.1
stress
McCas_H2_complete Calcium Chloride Dihydrate 83.3333333333333 mM
-1.2
+0.8
N.D.
+0.4
+2.2
stress
McCas_H2_complete Chlorate 250 mM
-0.6
-0.1
N.D.
+1.3
+1.7
nitrogen source
H2 N-free with 10mM L-Methionine
-0.4
+1.3
N.D.
-0.1
+1.5
nitrogen source
H2 N-free with 10mM L-Threonine
+1.1
+1.1
N.D.
-0.4
+0.7
stress
McCas_H2_complete sodium bromide 250 mM
-0.2
+0.8
N.D.
-0.0
+2.2
stress
McCas_H2_complete sodium iodide 250 mM
+1.3
+1.9
N.D.
+0.8
+0.1
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