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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS00825 and MMP_RS00830 are separated by 15 nucleotides
MMP_RS00830 and MMP_RS00835 are separated by 31 nucleotides
MMP_RS00835 and MMP_RS00840 are separated by 14 nucleotides
MMP_RS00840 and MMP_RS00845 are separated by 310 nucleotides
MMP_RS00825: MMP_RS00825 - fumarylacetoacetate hydrolase family protein, at 154,198 to 154,806
_RS00825
MMP_RS00830: MMP_RS00830 - purine phosphoribosyltransferase family protein, at 154,822 to 155,379
_RS00830
MMP_RS00835: MMP_RS00835 - FAD-dependent oxidoreductase, at 155,411 to 156,817
_RS00835
MMP_RS00840: MMP_RS00840 - nitrogenase iron protein, at 156,832 to 157,710
_RS00840
MMP_RS00845: MMP_RS00845 - acetate--CoA ligase, at 158,021 to 159,931
_RS00845
Group
Condition
MMP
_RS00825
MMP
_RS00830
MMP
_RS00835
MMP
_RS00840
MMP
_RS00845
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
-0.2
-3.9
N.D.
N.D.
-0.4
rich t2
H2 McCas, 5g/L bicarb, 40 psi H2CO2
-0.8
-1.0
N.D.
N.D.
-1.1
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
-0.0
-2.3
N.D.
N.D.
+0.2
nutrient t2
H2 deepwell acetate and casamino FREE
-0.2
-0.8
N.D.
N.D.
-1.0
stress
McCas_formate_complete Rifampicin 0.5 mM
-1.5
-0.9
N.D.
N.D.
+0.5
stress
McCas_H2_complete Sulfaquinoxaline 0.1 mM
-1.3
-0.6
N.D.
N.D.
+0.2
stress
McCas_formate_complete mercury (II) chloride 0.227272727272727 mM
+0.5
-1.9
N.D.
N.D.
-0.1
nitrogen source
H2 N-free with 10mM L-Phenylalanine
+0.3
-1.6
N.D.
N.D.
-0.2
nutrient t1
Mc formate, casamino free, with 10mM L-Methionine
+0.7
-1.7
N.D.
N.D.
-0.2
nitrogen source
H2 N-free with 10mM L-Methionine
+0.6
-1.8
N.D.
N.D.
-0.0
nitrogen source
H2 N-free with 10mM L-Methionine
+0.5
-1.5
N.D.
N.D.
+0.0
stress
McCas_formate_complete Calcium Chloride Dihydrate 166.666666666667 mM
+0.6
-1.7
N.D.
N.D.
+0.1
stress
McCas_formate_complete Fluorophosphate 62.5 mM
+0.5
-1.6
N.D.
N.D.
+0.3
nitrogen source
H2 N-free with 10mM L-Alanine
+0.6
-1.2
N.D.
N.D.
-0.2
nutrient t2
H2 deepwell autotrophic conditions
+0.6
-0.7
N.D.
N.D.
-0.6
nitrogen source
H2 N-free with 10mM L-tyrosine
-0.7
+1.3
N.D.
N.D.
-0.0
stress
McCas_formate_complete arsenate 0.416666666666667 mM
-0.7
+1.1
N.D.
N.D.
+0.3
stress
McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM
-0.4
+1.1
N.D.
N.D.
+0.4
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
+1.8
-0.2
N.D.
N.D.
-0.3
stress
H2 50 mM hypophosphite
+0.5
+1.3
N.D.
N.D.
-0.1
no stress control
McCas_H2_complete no stress control
+0.9
+1.1
N.D.
N.D.
-0.2
stress
McCas_H2_complete sulfate 125 mM
+0.6
+1.3
N.D.
N.D.
+0.0
no stress control
McCas_H2_complete no stress control
+1.3
+0.6
N.D.
N.D.
+0.1
stress
McCas_formate_complete arsenate 0.416666666666667 mM
-0.2
+1.7
N.D.
N.D.
+0.5
stress
McCas_H2_complete Spiramycin 0.1 mM
+0.1
+2.1
N.D.
N.D.
+0.3
stress
McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM
+0.4
+2.5
N.D.
N.D.
+0.1
nitrogen source
Formate N-free with 2mM Adenosine
+0.2
+5.5
N.D.
N.D.
+0.2
nitrogen source
H2 N-free with 2mM Adenosine
+0.1
+5.8
N.D.
N.D.
+0.3
nitrogen source
Formate N-free with 2mM Adenosine
+0.7
+5.4
N.D.
N.D.
+0.4
nitrogen source
Formate N-free with 2mM Adenosine
+0.6
+6.9
N.D.
N.D.
+0.2
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