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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS00820 and MMP_RS00825 are separated by 27 nucleotides
MMP_RS00825 and MMP_RS00830 are separated by 15 nucleotides
MMP_RS00830 and MMP_RS00835 are separated by 31 nucleotides
MMP_RS00835 and MMP_RS00840 are separated by 14 nucleotides
MMP_RS00820: MMP_RS00820 - DUF2117 domain-containing protein, at 153,055 to 154,170
_RS00820
MMP_RS00825: MMP_RS00825 - fumarylacetoacetate hydrolase family protein, at 154,198 to 154,806
_RS00825
MMP_RS00830: MMP_RS00830 - purine phosphoribosyltransferase family protein, at 154,822 to 155,379
_RS00830
MMP_RS00835: MMP_RS00835 - FAD-dependent oxidoreductase, at 155,411 to 156,817
_RS00835
MMP_RS00840: MMP_RS00840 - nitrogenase iron protein, at 156,832 to 157,710
_RS00840
Group
Condition
MMP
_RS00820
MMP
_RS00825
MMP
_RS00830
MMP
_RS00835
MMP
_RS00840
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
N.D.
-0.2
-3.9
N.D.
N.D.
stress
McCas_formate_complete Rifampicin 0.5 mM
N.D.
-1.5
-0.9
N.D.
N.D.
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations
N.D.
-0.0
-2.3
N.D.
N.D.
stress
McCas_H2_complete Sulfaquinoxaline 0.1 mM
N.D.
-1.3
-0.6
N.D.
N.D.
rich t2
H2 McCas, 5g/L bicarb, 40 psi H2CO2
N.D.
-0.8
-1.0
N.D.
N.D.
stress
McCas_formate_complete mercury (II) chloride 0.227272727272727 mM
N.D.
+0.5
-1.9
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Phenylalanine
N.D.
+0.3
-1.6
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Methionine
N.D.
+0.6
-1.8
N.D.
N.D.
stress
McCas_formate_complete Fluorophosphate 62.5 mM
N.D.
+0.5
-1.6
N.D.
N.D.
stress
McCas_formate_complete Calcium Chloride Dihydrate 166.666666666667 mM
N.D.
+0.6
-1.7
N.D.
N.D.
nutrient t1
Mc formate, casamino free, with 10mM L-Methionine
N.D.
+0.7
-1.7
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Methionine
N.D.
+0.5
-1.5
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Alanine
N.D.
+0.6
-1.2
N.D.
N.D.
nutrient t1
Mc formate, casamino free, with 10mM L-Threonine
N.D.
+0.8
-0.9
N.D.
N.D.
stress
McCas_formate_complete arsenate 0.416666666666667 mM
N.D.
-0.7
+1.1
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-tyrosine
N.D.
-0.7
+1.3
N.D.
N.D.
stress
McCas_formate_complete arsenate 0.416666666666667 mM
N.D.
-0.2
+1.7
N.D.
N.D.
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
N.D.
+1.8
-0.2
N.D.
N.D.
stress
McCas_H2_complete Benzethonium chloride 0.003125 mM
N.D.
+1.2
+0.5
N.D.
N.D.
no stress control
McCas_H2_complete no stress control
N.D.
+0.5
+1.2
N.D.
N.D.
stress
H2 50 mM hypophosphite
N.D.
+0.5
+1.3
N.D.
N.D.
stress
McCas_H2_complete sulfate 125 mM
N.D.
+0.6
+1.3
N.D.
N.D.
no stress control
McCas_H2_complete no stress control
N.D.
+1.3
+0.6
N.D.
N.D.
no stress control
McCas_H2_complete no stress control
N.D.
+0.9
+1.1
N.D.
N.D.
stress
McCas_H2_complete Spiramycin 0.1 mM
N.D.
+0.1
+2.1
N.D.
N.D.
stress
McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM
N.D.
+0.4
+2.5
N.D.
N.D.
nitrogen source
Formate N-free with 2mM Adenosine
N.D.
+0.2
+5.5
N.D.
N.D.
nitrogen source
H2 N-free with 2mM Adenosine
N.D.
+0.1
+5.8
N.D.
N.D.
nitrogen source
Formate N-free with 2mM Adenosine
N.D.
+0.7
+5.4
N.D.
N.D.
nitrogen source
Formate N-free with 2mM Adenosine
N.D.
+0.6
+6.9
N.D.
N.D.
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