Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS00785 and MMP_RS00795 are separated by 626 nucleotidesMMP_RS00795 and MMP_RS00800 are separated by 23 nucleotidesMMP_RS00800 and MMP_RS00805 are separated by 48 nucleotidesMMP_RS00805 and MMP_RS00810 are separated by 45 nucleotides MMP_RS00785: MMP_RS00785 - deoxyhypusine synthase, at 143,404 to 144,411 _RS00785 MMP_RS00795: MMP_RS00795 - formate dehydrogenase H subunit alpha selenocysteine-containing, at 145,038 to 147,068 _RS00795 MMP_RS00800: MMP_RS00800 - Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain, at 147,092 to 148,219 _RS00800 MMP_RS00805: MMP_RS00805 - carbamoyltransferase HypF, at 148,268 to 150,583 _RS00805 MMP_RS00810: MMP_RS00810 - topoisomerase DNA-binding C4 zinc finger domain-containing protein, at 150,629 to 151,501 _RS00810
Group Condition MMP_RS00785 MMP_RS00795 MMP_RS00800 MMP_RS00805 MMP_RS00810
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations N.D. +0.1 +0.2 N.D. -7.4
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 N.D. +0.1 +0.0 N.D. -7.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations N.D. -0.1 +0.2 N.D. -6.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations N.D. +0.2 +0.1 N.D. -6.5
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations N.D. +0.1 +0.1 N.D. -6.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations N.D. +0.2 +0.2 N.D. -6.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations N.D. +0.1 +0.1 N.D. -5.7
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations N.D. -0.4 +0.1 N.D. -4.9
nutrient t2 H2 deepwell acetate FREE N.D. +0.2 +0.7 N.D. -5.8
nutrient t2 H2 deepwell acetate and vitamin FREE N.D. -0.1 +0.4 N.D. -4.7
nutrient t2 H2 deepwell vitamin and casamino FREE N.D. -0.3 +0.0 N.D. -4.0
nutrient t2 H2 deepwell acetate and vitamin FREE N.D. +0.1 +0.1 N.D. -4.5
nutrient t2 H2 deepwell acetate FREE N.D. +0.1 +0.0 N.D. -4.1
nutrient t2 H2 deepwell acetate FREE N.D. +0.9 -0.1 N.D. -4.7
rich t2 H2 McCas deepwell complete N.D. +0.7 +0.1 N.D. -4.3
nitrogen source H2 N-free with 10mM L-Glutamic N.D. +0.4 +0.4 N.D. -4.1
nutrient t2 H2 deepwell acetate and vitamin FREE N.D. +0.3 +0.3 N.D. -3.8
stress McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM N.D. +0.1 +0.6 N.D. -3.5
nutrient t2 H2 deepwell vitamin FREE N.D. +0.4 +0.3 N.D. -3.5
no stress control McCas_H2_complete no stress control N.D. +0.5 +0.4 N.D. -3.7
nitrogen source H2 N-free with 10mM L-Arginine N.D. +0.2 +0.5 N.D. -3.4
stress H2 McCas with 1 mM (NH4)2S control N.D. +0.3 +0.3 N.D. -3.3
stress H2 McCas with 40 minute oxygen exposure N.D. +0.4 +0.5 N.D. -3.5
stress H2 McCas with 0.1 mM Na2S N.D. +0.2 +0.4 N.D. -3.3
stress H2 McCas with 40 minute oxygen exposure N.D. +0.3 +0.6 N.D. -3.5
stress H2 McCas with 40 minute oxygen exposure N.D. +0.4 +0.5 N.D. -3.5
stress H2 McCas with 1 mM (NH4)2S control N.D. +0.4 +0.4 N.D. -3.1
stress H2 McCas with 1 mM Na2S N.D. +0.4 +0.5 N.D. -3.1
stress McCas_H2_complete dimetridazole 0.00833333333333333 mM N.D. +0.5 +1.1 N.D. -2.7
stress McCas_H2_complete Cesium chloride 41.6666666666667 mM N.D. +1.1 +0.8 N.D. -2.7
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