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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS00635 and MMP_RS00640 are separated by 140 nucleotides
MMP_RS00640 and MMP_RS00645 are separated by 32 nucleotides
MMP_RS00645 and MMP_RS00650 overlap by 10 nucleotides
MMP_RS00650 and MMP_RS00655 are separated by 3 nucleotides
MMP_RS00635: MMP_RS00635 - energy-coupling factor transporter transmembrane protein EcfT, at 115,687 to 116,211
_RS00635
MMP_RS00640: MMP_RS00640 - ABC transporter substrate-binding protein, at 116,352 to 117,383
_RS00640
MMP_RS00645: MMP_RS00645 - iron ABC transporter permease, at 117,416 to 119,032
_RS00645
MMP_RS00650: MMP_RS00650 - ABC transporter ATP-binding protein, at 119,023 to 119,991
_RS00650
MMP_RS00655: MMP_RS00655 - hypothetical protein, at 119,995 to 120,534
_RS00655
Group
Condition
MMP
_RS00635
MMP
_RS00640
MMP
_RS00645
MMP
_RS00650
MMP
_RS00655
stress
McCas_formate_complete arsenate 0.416666666666667 mM
-0.9
+0.2
-0.4
+0.6
-0.8
stress
Formate with Bacitracin 15.6 uM
+0.8
+0.3
-0.0
-0.6
-1.7
nitrogen source
H2 N-free with 10mM L-tyrosine
-0.6
-0.2
+0.5
+0.7
-0.9
stress
Formate McCas no stress control 2
+0.8
+0.9
-0.1
-0.6
-0.6
stress
McCas_H2_complete Cadmium chloride hemipentahydrate 0.555555555555556 mM
-0.3
-0.6
-0.2
+0.7
+1.1
stress
McCas_H2_complete Hydroxylamine 1.04166666666667 mM
-0.5
+0.2
-0.5
+0.5
+1.4
stress
McCas_H2_complete Irgasan 0.025 mM
+0.4
-0.5
-0.6
+0.3
+1.6
stress
McCas_H2_complete Benzethonium chloride 0.003125 mM
-0.1
-0.6
-0.0
+0.4
+1.6
nitrogen source
H2 N-free with 10mM Gly-Glu
+0.1
+0.3
-0.4
+0.5
+1.2
no stress control
McCas_H2_complete no stress control
+0.7
-0.5
-0.0
+0.7
+0.9
stress
McCas_H2_complete Cesium chloride 41.6666666666667 mM
+0.6
-0.3
+0.3
+0.5
+1.0
nitrogen source
H2 N-free with 10mM L-Valine
-0.3
+0.1
+0.5
+0.7
+1.1
stress
McCas_H2_complete sodium nitrite 1.04166666666667 mM
-0.3
+0.3
-0.2
+0.3
+2.0
stress
McCas_H2_complete 2-Mercaptopyridine N-oxide 0.02 mM
+0.9
-0.0
-0.3
+0.2
+1.5
stress
McCas_H2_complete Hydroxylamine 1.04166666666667 mM
-0.3
-0.1
+0.1
-0.1
+2.5
stress
McCas_H2_complete Lithium chloride 250 mM
+0.4
+0.3
-0.3
+0.7
+1.3
nitrogen source
H2 N-free with 10mM L-Leucine
-0.3
+0.4
+0.5
+0.8
+1.0
nitrogen source
H2 N-free with 10mM Putrescine
-0.1
+0.1
-0.1
+0.9
+1.7
nitrogen source
H2 N-free with 10mM L-Tryptophan
-0.2
+0.1
+0.6
+0.7
+1.5
no stress control
McCas_H2_complete no stress control
+0.6
+0.5
+0.5
+0.4
+0.7
nitrogen source
H2 N-free with 10mM Putrescine
-0.1
+0.2
+0.3
+0.7
+1.6
no stress control
McCas_H2_complete no stress control
+0.5
+0.1
+0.5
+0.6
+1.1
stress
McCas_H2_complete Antimycin A 0.01 mM
+0.6
+0.0
+0.1
+0.3
+1.9
nitrogen source
H2 N-free with 10mM L-Leucine
-0.2
+0.3
+0.3
+0.7
+1.9
nutrient t2
H2 deepwell acetate FREE
+0.9
+0.2
+0.2
+0.6
+1.2
stress
McCas_H2_complete Calcium Chloride Dihydrate 83.3333333333333 mM
+0.6
+0.3
+0.4
+0.4
+1.4
nitrogen source
H2 N-free with 10mM Uridine
+0.8
+0.4
-0.0
+0.1
+2.2
no stress control
McCas_H2_complete no stress control
+0.7
+0.4
+0.6
+0.2
+1.7
stress
McCas_H2_complete Spiramycin 0.1 mM
+0.6
+0.3
-0.3
+0.5
+2.4
stress
McCas_H2_complete metronidazole 0.00833333333333333 mM
+0.6
+0.5
+0.1
+0.5
+1.9
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