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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS00625 and MMP_RS00630 are separated by 102 nucleotides
MMP_RS00630 and MMP_RS00635 are separated by 9 nucleotides
MMP_RS00635 and MMP_RS00640 are separated by 140 nucleotides
MMP_RS00640 and MMP_RS00645 are separated by 32 nucleotides
MMP_RS00625: MMP_RS00625 - hypothetical protein, at 114,454 to 115,014
_RS00625
MMP_RS00630: MMP_RS00630 - ECF transporter S component, at 115,117 to 115,677
_RS00630
MMP_RS00635: MMP_RS00635 - energy-coupling factor transporter transmembrane protein EcfT, at 115,687 to 116,211
_RS00635
MMP_RS00640: MMP_RS00640 - ABC transporter substrate-binding protein, at 116,352 to 117,383
_RS00640
MMP_RS00645: MMP_RS00645 - iron ABC transporter permease, at 117,416 to 119,032
_RS00645
Group
Condition
MMP
_RS00625
MMP
_RS00630
MMP
_RS00635
MMP
_RS00640
MMP
_RS00645
stress
H2 50 mM hypophosphite
-1.9
-0.6
-0.7
-0.3
-0.3
stress
McCas_formate_complete metavanadate 4.54545454545455 mM
-0.6
-0.4
-1.2
-0.2
-0.4
stress
H2 50 mM hypophosphite
-1.6
+0.1
-0.4
-0.1
-0.1
stress
McCas_formate_complete nitrate 35.7142857142857 mM
-0.7
-0.6
-0.5
-0.0
+0.2
stress
McCas_formate_complete Calcium Chloride Dihydrate 166.666666666667 mM
-0.9
-0.4
-0.5
+0.3
+0.1
stress
McCas_formate_complete arsenate 0.416666666666667 mM
-0.3
+0.2
-0.9
+0.2
-0.4
nitrogen source
H2 N-free with 10mM L-tyrosine
+0.7
-0.3
-0.6
-0.2
+0.5
stress
McCas_H2_complete 5-Fluorouracil 0.00833333333333333 mM
+0.3
+0.3
-0.5
-0.7
+0.6
stress
McCas_H2_complete Anhydrotetracycline 0.05 mM
+0.5
+0.6
-0.1
-0.7
-0.2
mixed community
Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations
+0.8
-0.2
+0.1
-0.5
+0.3
stress
McCas_formate_complete rubidium chloride 62.5 mM
+0.1
+0.9
-0.8
+0.6
-0.1
no stress control
McCas_H2_complete no stress control
+0.3
+0.4
+0.7
-0.5
-0.0
stress
Formate 100 mM hypophosphite
+0.9
+0.1
-0.4
+0.4
+0.1
stress
McCas_H2_complete Nitrofurantoin 0.1 mM
-0.5
+1.0
+0.3
+0.1
+0.3
stress
McCas_H2_complete Fluorophosphate 62.5 mM
+0.4
-0.0
+0.8
-0.2
+0.5
stress
Formate 200 mM hypophosphite
-0.1
+1.6
-0.2
+0.1
-0.0
stress
McCas_H2_complete Cesium chloride 41.6666666666667 mM
+0.3
+1.0
+0.4
-0.2
+0.2
stress
McCas_formate_complete gold (III) chloride 0.0714285714285714 mM
+0.6
+1.2
-0.2
+0.2
-0.0
nutrient t2
H2 deepwell acetate FREE
-0.1
+0.7
+0.9
+0.2
+0.2
nutrient t1
Mc formate, casamino free, with 10mM L-Ornithine
-0.1
+0.6
+0.8
+0.2
+0.4
nutrient t2
Formate deepwell acetate FREE
+0.2
+0.1
+0.7
+0.7
+0.1
nutrient t2
H2 deepwell acetate and casamino FREE
-0.1
+0.0
+1.2
+0.6
+0.2
stress
McCas_H2_complete Strontium chloride 125 mM
+0.4
+0.3
+0.8
+0.5
+0.0
nutrient t1
Mc formate, casamino free, with 10mM L-Threonine
+0.7
+0.6
-0.1
+0.0
+0.7
stress
McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM
+0.8
+0.1
+0.8
+0.5
-0.2
no stress control
McCas_H2_complete no stress control
+0.3
+0.3
+0.6
+0.5
+0.5
nutrient t1
Mc formate, casamino free, with 10mM L-Threonine
+0.7
+0.5
+0.2
+0.4
+0.2
stress
McCas_H2_complete dimetridazole 0.00833333333333333 mM
+1.2
+0.8
+0.2
+0.1
+0.1
stress
McCas_H2_complete Antimycin A 0.01 mM
+0.1
+0.8
+0.9
+0.4
+0.6
no stress control
McCas_H2_complete no stress control
+0.6
+0.9
+0.7
+0.4
+0.6
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