Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS00565 and MMP_RS00570 are separated by 88 nucleotidesMMP_RS00570 and MMP_RS00575 are separated by 118 nucleotidesMMP_RS00575 and MMP_RS00580 are separated by 157 nucleotidesMMP_RS00580 and MMP_RS00585 are separated by 46 nucleotides MMP_RS00565: MMP_RS00565 - CBS domain-containing protein, at 110,490 to 110,975 _RS00565 MMP_RS00570: MMP_RS00570 - protein-L-isoaspartate O-methyltransferase, at 111,064 to 111,702 _RS00570 MMP_RS00575: MMP_RS00575 - pyridoxal 5'-phosphate synthase lyase subunit PdxS, at 111,821 to 112,720 _RS00575 MMP_RS00580: MMP_RS00580 - tRNA-Thr, at 112,878 to 112,951 _RS00580 MMP_RS00585: MMP_RS00585 - tRNA-Pro, at 112,998 to 113,074 _RS00585
Group Condition MMP_RS00565 MMP_RS00570 MMP_RS00575 MMP_RS00580 MMP_RS00585
nutrient t1 Mc formate, casamino free, with 10mM L-Threonine -0.6 -1.5 N.D. N.D. N.D.
nutrient t1 Mc formate, casamino free, with 10mM L-Threonine -0.8 -1.0 N.D. N.D. N.D.
stress McCas_formate_complete sulfate 125 mM +0.2 -1.8 N.D. N.D. N.D.
nitrogen source H2 N-free with 10mM Thymidine +0.3 -1.8 N.D. N.D. N.D.
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM +0.7 -2.0 N.D. N.D. N.D.
stress McCas_H2_complete Antimycin A 0.01 mM +0.3 -1.5 N.D. N.D. N.D.
stress McCas_H2_complete Fluorophosphate 62.5 mM +0.5 -1.5 N.D. N.D. N.D.
stress McCas_H2_complete metavanadate 4.54545454545455 mM +0.8 -1.7 N.D. N.D. N.D.
no stress control McCas_H2_complete no stress control +0.4 -1.3 N.D. N.D. N.D.
stress McCas_H2_complete metronidazole 0.000833333333333333 +0.4 -1.2 N.D. N.D. N.D.
nitrogen source H2 N-free with 10mM L-Arginine +0.5 -1.2 N.D. N.D. N.D.
stress McCas_H2_complete Irgasan 0.025 mM +0.6 -1.3 N.D. N.D. N.D.
stress McCas_formate_complete arsenate 0.416666666666667 mM +0.9 -1.2 N.D. N.D. N.D.
no stress control McCas_H2_complete no stress control +0.8 -1.1 N.D. N.D. N.D.
no stress control McCas_H2_complete no stress control +1.0 -1.2 N.D. N.D. N.D.
stress McCas_H2_complete metronidazole 0.00833333333333333 mM +0.9 -0.8 N.D. N.D. N.D.
stress McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM +1.0 -0.8 N.D. N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -0.4 +1.4 N.D. N.D. N.D.
stress McCas_H2_complete Antimycin A 0.01 mM +1.5 -0.5 N.D. N.D. N.D.
stress McCas_H2_complete 3-nitroxypropanol 0.00833333333333333 mM +1.4 -0.3 N.D. N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -0.3 +1.5 N.D. N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -0.3 +1.6 N.D. N.D. N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -0.3 +1.5 N.D. N.D. N.D.
nitrogen source H2 N-free with 10mM L-Threonine -0.2 +1.7 N.D. N.D. N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -0.5 +2.2 N.D. N.D. N.D.
stress McCas_H2_complete Hydroxylamine 2.08333333333333 mM +0.7 +1.4 N.D. N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations +1.5 +0.8 N.D. N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations +1.7 +0.8 N.D. N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations +2.3 +0.2 N.D. N.D. N.D.
stress McCas_H2_complete Cadmium chloride hemipentahydrate 0.555555555555556 mM +0.2 +2.4 N.D. N.D. N.D.
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