Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS00560 and MMP_RS00565 are separated by 14 nucleotidesMMP_RS00565 and MMP_RS00570 are separated by 88 nucleotidesMMP_RS00570 and MMP_RS00575 are separated by 118 nucleotidesMMP_RS00575 and MMP_RS00580 are separated by 157 nucleotides MMP_RS00560: MMP_RS00560 - cation:proton antiporter, at 109,297 to 110,475 _RS00560 MMP_RS00565: MMP_RS00565 - CBS domain-containing protein, at 110,490 to 110,975 _RS00565 MMP_RS00570: MMP_RS00570 - protein-L-isoaspartate O-methyltransferase, at 111,064 to 111,702 _RS00570 MMP_RS00575: MMP_RS00575 - pyridoxal 5'-phosphate synthase lyase subunit PdxS, at 111,821 to 112,720 _RS00575 MMP_RS00580: MMP_RS00580 - tRNA-Thr, at 112,878 to 112,951 _RS00580
Group Condition MMP_RS00560 MMP_RS00565 MMP_RS00570 MMP_RS00575 MMP_RS00580
nutrient t1 Mc formate, casamino free, with 10mM L-Threonine -0.6 -0.6 -1.5 N.D. N.D.
nutrient t1 Mc formate, casamino free, with 10mM L-Threonine -0.4 -0.8 -1.0 N.D. N.D.
stress McCas_formate_complete sulfate 125 mM +0.0 +0.2 -1.8 N.D. N.D.
stress McCas_H2_complete Fluorophosphate 62.5 mM -0.1 +0.5 -1.5 N.D. N.D.
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM +0.3 +0.7 -2.0 N.D. N.D.
nitrogen source H2 N-free with 10mM Thymidine +0.4 +0.3 -1.8 N.D. N.D.
stress McCas_H2_complete metavanadate 4.54545454545455 mM +0.1 +0.8 -1.7 N.D. N.D.
stress McCas_H2_complete Irgasan 0.025 mM +0.0 +0.6 -1.3 N.D. N.D.
no stress control McCas_H2_complete no stress control +0.3 +0.4 -1.3 N.D. N.D.
stress McCas_formate_complete Novobiocin 0.025 mM +0.4 +0.3 -1.3 N.D. N.D.
stress McCas_H2_complete dimetridazole 0.00833333333333333 mM +0.5 +0.2 -1.2 N.D. N.D.
stress McCas_H2_complete Chlorpromazine 0.0333333333333333 mM +0.5 +0.3 -1.2 N.D. N.D.
stress McCas_formate_complete arsenate 0.416666666666667 mM +0.2 +0.9 -1.2 N.D. N.D.
stress McCas_H2_complete Phenazine ethosulfate 0.1 mM +0.4 +0.5 -1.0 N.D. N.D.
no stress control McCas_H2_complete no stress control +0.3 +1.0 -1.2 N.D. N.D.
stress McCas_formate_complete Fluorophosphate 62.5 mM +1.0 +0.4 -1.2 N.D. N.D.
rich t2 H2 McCas deepwell complete +0.6 +0.6 -0.8 N.D. N.D.
stress McCas_formate_complete nitrate 35.7142857142857 mM +1.2 +0.3 -0.5 N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE +0.0 -0.3 +1.6 N.D. N.D.
nitrogen source H2 N-free with 10mM L-Threonine -0.2 -0.2 +1.7 N.D. N.D.
stress McCas_H2_complete Antimycin A 0.01 mM +0.3 +1.5 -0.5 N.D. N.D.
stress Formate with nitrate 62.5 mM +1.4 +0.5 -0.5 N.D. N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE +0.1 -0.5 +2.2 N.D. N.D.
stress Formate with nitrate 62.5 mM +1.3 +0.9 -0.2 N.D. N.D.
stress Formate 100 mM hypophosphite +0.8 +1.0 +0.6 N.D. N.D.
stress McCas_H2_complete Hydroxylamine 2.08333333333333 mM +0.5 +0.7 +1.4 N.D. N.D.
stress McCas_H2_complete Cadmium chloride hemipentahydrate 0.555555555555556 mM +0.2 +0.2 +2.4 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations +1.2 +1.5 +0.8 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations +1.4 +1.7 +0.8 N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations +1.8 +2.3 +0.2 N.D. N.D.
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