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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS00535 and MMP_RS00540 are separated by 2 nucleotides
MMP_RS00540 and MMP_RS00545 are separated by 124 nucleotides
MMP_RS00545 and MMP_RS00550 are separated by 30 nucleotides
MMP_RS00550 and MMP_RS00555 are separated by 142 nucleotides
MMP_RS00535: MMP_RS00535 - TIGR00375 family protein, at 104,708 to 105,892
_RS00535
MMP_RS00540: MMP_RS00540 - PLP-dependent aminotransferase family protein, at 105,895 to 107,082
_RS00540
MMP_RS00545: MMP_RS00545 - XRE family transcriptional regulator, at 107,207 to 107,755
_RS00545
MMP_RS00550: MMP_RS00550 - 4Fe-4S binding protein, at 107,786 to 107,983
_RS00550
MMP_RS00555: MMP_RS00555 - MFS transporter, at 108,126 to 109,277
_RS00555
Group
Condition
MMP
_RS00535
MMP
_RS00540
MMP
_RS00545
MMP
_RS00550
MMP
_RS00555
nitrogen source
H2 N-free with 10mM L-Histidine
-0.5
+0.1
-0.4
N.D.
-5.4
nitrogen source
H2 N-free with 10mM L-Arginine
-0.9
+0.1
+0.5
N.D.
-5.9
nitrogen source
H2 N-free with 10mM L-Isoleucine
-1.0
+0.2
-0.1
N.D.
-5.2
nitrogen source
H2 N-free with 10mM Thymidine
-1.3
+0.0
-0.3
N.D.
-4.1
nitrogen source
H2 N-free with 10mM L-Histidine
-0.5
+0.2
-0.0
N.D.
-5.3
nitrogen source
H2 N-free with 10mM L-Ornithine
-0.8
-0.0
-0.1
N.D.
-4.6
nitrogen source
H2 N-free with 10mM L-Ornithine
-1.0
+0.1
-0.0
N.D.
-4.5
nitrogen source
H2 N-free with 10mM L-Citrulline
-0.5
+0.2
+0.5
N.D.
-5.6
nitrogen source
H2 N-free with 10mM L-Methionine
-0.9
-0.1
+0.7
N.D.
-5.2
nitrogen source
H2 N-free with 10mM L-Ornithine
-0.6
+0.1
+0.0
N.D.
-4.9
nitrogen source
H2 N-free with 10mM L-Methionine
-0.7
-0.1
+0.2
N.D.
-4.8
nitrogen source
H2 N-free with 10mM L-Valine
-0.6
+0.2
+0.4
N.D.
-5.3
nitrogen source
H2 N-free with 10mM L-Methionine
-0.4
-0.4
+0.6
N.D.
-5.1
nitrogen source
H2 N-free with 10mM L-Lysine
-0.2
+0.3
+0.5
N.D.
-5.7
nitrogen source
H2 N-free with 10mM L-Arginine
-0.9
+0.2
+0.3
N.D.
-4.7
nitrogen source
H2 N-free with 10mM Gly-Glu
-0.5
+0.3
-0.1
N.D.
-4.8
nitrogen source
H2 N-free with 10mM L-Proline
-0.5
-0.2
+0.3
N.D.
-4.8
nitrogen source
H2 N-free with 10mM D-glucosamine
-0.6
+0.2
+0.1
N.D.
-4.8
nitrogen source
H2 N-free with 10mM L-Asparagine
-0.6
+0.2
-0.0
N.D.
-4.5
nitrogen source
H2 N-free with 2.5mM Cytosine
-0.1
+0.2
-0.2
N.D.
-4.8
nitrogen source
H2 N-free with 10mM L-Aspartic Acid
-0.9
+0.2
-0.1
N.D.
-4.2
nitrogen source
H2 N-free with 10mM Thymidine
-1.4
+0.1
+0.4
N.D.
-3.9
nitrogen source
H2 N-free with 10mM L-Citrulline
-0.5
+0.2
+0.4
N.D.
-4.9
nitrogen source
H2 N-free with 10mM L-Leucine
-0.2
+0.3
+0.1
N.D.
-4.9
nitrogen source
H2 N-free with 10mM L-Valine
-1.0
+0.4
+0.0
N.D.
-4.0
nitrogen source
H2 N-free with 10mM L-Leucine
-0.2
+0.4
+0.1
N.D.
-4.9
nitrogen source
N2 fixation, H2 media
-0.2
+0.4
+0.1
N.D.
-4.6
nitrogen source
H2 N-free with 2mM Adenine
-0.8
+0.3
+0.3
N.D.
-4.1
nitrogen source
H2 N-free with 10mM L-Lysine
-1.3
+0.4
+0.2
N.D.
-3.5
nitrogen source
H2 N-free with 2mM Thymine
-0.6
+0.5
+0.1
N.D.
-4.2
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