Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS00525 and MMP_RS00530 are separated by 85 nucleotidesMMP_RS00530 and MMP_RS00535 are separated by 21 nucleotidesMMP_RS00535 and MMP_RS00540 are separated by 2 nucleotidesMMP_RS00540 and MMP_RS00545 are separated by 124 nucleotides MMP_RS00525: MMP_RS00525 - 50S ribosomal protein L21e, at 102,895 to 103,188 _RS00525 MMP_RS00530: MMP_RS00530 - tRNA pseudouridine(54/55) synthase Pus10, at 103,274 to 104,686 _RS00530 MMP_RS00535: MMP_RS00535 - TIGR00375 family protein, at 104,708 to 105,892 _RS00535 MMP_RS00540: MMP_RS00540 - PLP-dependent aminotransferase family protein, at 105,895 to 107,082 _RS00540 MMP_RS00545: MMP_RS00545 - XRE family transcriptional regulator, at 107,207 to 107,755 _RS00545
Group Condition MMP_RS00525 MMP_RS00530 MMP_RS00535 MMP_RS00540 MMP_RS00545
nitrogen source H2 N-free with 10mM Uridine N.D. -0.5 -1.2 -0.1 -1.0
nutrient t1 Mc formate, casamino free, with 10mM L-Ornithine N.D. -0.3 -1.9 +0.1 -0.6
stress McCas_H2_complete 1,2-dimethyl-5-nitroimidazole 0.00833333333333333 mM N.D. -0.6 -1.7 -0.2 -0.0
nitrogen source H2 N-free with 10mM L-Serine N.D. -0.1 -1.9 -0.0 -0.2
stress McCas_formate_complete 5-Fluorouracil 4.16666666666667E-05 mM N.D. -0.4 -1.3 -0.7 +0.4
nitrogen source H2 N-free with 2mM Adenine N.D. -0.9 -1.2 +0.2 +0.1
nitrogen source H2 N-free with 10mM L-tyrosine N.D. +0.2 +0.2 -0.7 -1.2
stress McCas_formate_complete Fluorophosphate 62.5 mM N.D. +0.8 -1.4 +0.0 -0.7
stress McCas_H2_complete Nitrofurantoin 0.1 mM N.D. -0.4 -1.5 +0.4 +0.4
nitrogen source H2 N-free with 10mM L-Lysine N.D. -0.3 -1.3 +0.4 +0.2
nutrient t2 H2 deepwell acetate FREE N.D. -0.5 -1.1 +0.5 +0.5
stress McCas_H2_complete sodium bromide 250 mM N.D. -0.2 -1.3 +0.4 +0.5
stress McCas_H2_complete Chloride 500 mM N.D. -0.4 -1.2 +0.6 +0.6
stress McCas_H2_complete 2-Mercaptopyridine N-oxide 0.02 mM N.D. -0.0 -1.2 +0.4 +0.7
stress McCas_H2_complete Calcium Chloride Dihydrate 83.3333333333333 mM N.D. +0.4 -1.3 +0.1 +0.7
stress McCas_H2_complete Zinc Pyrithione 0.0142857142857143 mM N.D. +0.2 -1.3 +0.6 +0.8
stress McCas_formate_complete Chloride 250 mM N.D. +0.9 -0.4 -0.6 +0.8
stress H2 50 mM hypophosphite N.D. +1.9 -1.1 +0.1 +0.0
stress H2 50 mM hypophosphite N.D. +1.9 -0.5 -0.3 -0.0
stress McCas_H2_complete Anhydrotetracycline 0.05 mM N.D. -0.0 -0.7 +1.3 +0.5
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations N.D. -1.1 +1.2 +0.8 +0.4
stress McCas_H2_complete Zinc Pyrithione 0.0142857142857143 mM N.D. +0.3 -0.6 +0.8 +0.8
nitrogen source H2 N-free with 2mM Adenosine N.D. +0.1 +2.2 +0.4 -1.2
no stress control McCas_formate_complete no stress control N.D. +0.5 +0.4 -0.3 +1.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations N.D. -0.2 +1.3 +0.9 +0.0
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. +0.9 +1.1 +0.2 +0.1
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. +0.7 +1.5 +0.5 -0.2
stress Formate McCas no stress control 2 N.D. +0.9 +0.6 +0.5 +0.7
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. +0.9 +1.9 +0.5 -0.2
stress McCas_H2_complete Cesium chloride 41.6666666666667 mM N.D. -0.5 +3.4 +0.4 -0.2
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