Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS00475 and MMP_RS00480 are separated by 317 nucleotidesMMP_RS00480 and MMP_RS00485 are separated by 51 nucleotidesMMP_RS00485 and MMP_RS00490 overlap by 1 nucleotidesMMP_RS00490 and MMP_RS00495 are separated by 134 nucleotides MMP_RS00475: MMP_RS00475 - Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain, at 93,984 to 95,063 _RS00475 MMP_RS00480: MMP_RS00480 - hypothetical protein, at 95,381 to 96,079 _RS00480 MMP_RS00485: MMP_RS00485 - mRNA surveillance protein pelota, at 96,131 to 97,177 _RS00485 MMP_RS00490: MMP_RS00490 - Tfx family DNA-binding protein, at 97,177 to 97,626 _RS00490 MMP_RS00495: MMP_RS00495 - hydroxymethylglutaryl-CoA reductase (NADPH), at 97,761 to 98,987 _RS00495
Group Condition MMP_RS00475 MMP_RS00480 MMP_RS00485 MMP_RS00490 MMP_RS00495
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations -2.7 +0.1 N.D. N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations -2.5 +0.2 N.D. N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations -2.2 +0.1 N.D. N.D. N.D.
nutrient t2 Formate deepwell autotrophic conditions -1.7 -0.2 N.D. N.D. N.D.
nutrient t2 Formate deepwell autotrophic conditions -1.8 -0.1 N.D. N.D. N.D.
stress Formate 100 mM hypophosphite -1.7 -0.1 N.D. N.D. N.D.
nutrient t2 Formate deepwell autotrophic conditions -1.5 -0.2 N.D. N.D. N.D.
nutrient t1 Formate deepwell casamino FREE -1.2 -0.3 N.D. N.D. N.D.
nutrient t2 Formate deepwell vitamin and casamino FREE -1.3 -0.2 N.D. N.D. N.D.
nutrient t2 Formate deepwell acetate FREE -1.5 +0.0 N.D. N.D. N.D.
nutrient t2 Formate deepwell acetate and casamino FREE -1.2 -0.3 N.D. N.D. N.D.
nutrient t2 Formate deepwell acetate and casamino FREE -1.2 -0.2 N.D. N.D. N.D.
nutrient t2 Formate deepwell vitamin and casamino FREE -1.1 -0.3 N.D. N.D. N.D.
nutrient t2 Formate deepwell vitamin and casamino FREE -1.3 -0.1 N.D. N.D. N.D.
nutrient t1 Formate deepwell casamino FREE -1.2 -0.2 N.D. N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations -1.5 +0.1 N.D. N.D. N.D.
stress Formate 100 mM hypophosphite -1.5 +0.2 N.D. N.D. N.D.
nutrient t2 H2 deepwell acetate and casamino FREE -1.2 -0.1 N.D. N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations -1.4 +0.0 N.D. N.D. N.D.
nutrient t2 Formate deepwell acetate and casamino FREE -1.1 -0.3 N.D. N.D. N.D.
nutrient t1 Formate deepwell vitamin FREE -1.3 +0.0 N.D. N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations -1.7 +0.4 N.D. N.D. N.D.
nutrient t1 Formate deepwell vitamin FREE -1.4 +0.1 N.D. N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations -1.3 +0.2 N.D. N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 10 generations -1.3 +0.2 N.D. N.D. N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations -1.2 +0.2 N.D. N.D. N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE -1.2 +0.3 N.D. N.D. N.D.
nutrient t2 H2 deepwell vitamin and casamino FREE -1.0 +0.4 N.D. N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -0.8 +0.6 N.D. N.D. N.D.
nitrogen source H2 N-free with 2mM Adenosine +1.1 +0.4 N.D. N.D. N.D.
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