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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS00455 and MMP_RS00460 are separated by 146 nucleotides
MMP_RS00460 and MMP_RS00465 are separated by 27 nucleotides
MMP_RS00465 and MMP_RS00470 are separated by 20 nucleotides
MMP_RS00470 and MMP_RS00475 are separated by 32 nucleotides
MMP_RS00455: MMP_RS00455 - orotate phosphoribosyltransferase-like protein, at 89,745 to 90,362
_RS00455
MMP_RS00460: MMP_RS00460 - glutamine amidotransferase family protein, at 90,509 to 91,600
_RS00460
MMP_RS00465: MMP_RS00465 - alpha-hydroxy-acid oxidizing protein, at 91,628 to 93,160
_RS00465
MMP_RS00470: MMP_RS00470 - hypothetical protein, at 93,181 to 93,951
_RS00470
MMP_RS00475: MMP_RS00475 - Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain, at 93,984 to 95,063
_RS00475
Group
Condition
MMP
_RS00455
MMP
_RS00460
MMP
_RS00465
MMP
_RS00470
MMP
_RS00475
nutrient t2
Formate deepwell autotrophic conditions
-4.7
N.D.
N.D.
N.D.
-1.8
nutrient t2
Formate deepwell autotrophic conditions
-4.7
N.D.
N.D.
N.D.
-1.7
nutrient t2
Formate deepwell autotrophic conditions
-4.4
N.D.
N.D.
N.D.
-1.5
nitrogen source
H2 N-free with 10mM L-Histidine
-5.0
N.D.
N.D.
N.D.
-0.3
nutrient t2
Formate deepwell acetate and casamino FREE
-4.0
N.D.
N.D.
N.D.
-1.2
nutrient t2
Formate deepwell acetate and casamino FREE
-3.8
N.D.
N.D.
N.D.
-1.2
nitrogen source
H2 N-free with 10mM L-Arginine
-4.8
N.D.
N.D.
N.D.
+0.2
nutrient t2
Formate deepwell acetate and casamino FREE
-3.5
N.D.
N.D.
N.D.
-1.1
nitrogen source
H2 N-free with 10mM L-Methionine
-4.2
N.D.
N.D.
N.D.
-0.2
nitrogen source
H2 N-free with 10mM L-Histidine
-4.3
N.D.
N.D.
N.D.
-0.1
nitrogen source
H2 N-free with 10mM Glycine
-4.5
N.D.
N.D.
N.D.
+0.1
nitrogen source
H2 N-free with 10mM L-Asparagine
-4.3
N.D.
N.D.
N.D.
+0.1
nitrogen source
H2 N-free with 10mM L-Histidine
-4.1
N.D.
N.D.
N.D.
-0.1
nitrogen source
H2 N-free with 10mM L-Ornithine
-4.1
N.D.
N.D.
N.D.
+0.0
nutrient t2
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE
-3.2
N.D.
N.D.
N.D.
-0.7
nitrogen source
N2 fixation, H2 media
-3.8
N.D.
N.D.
N.D.
-0.1
nitrogen source
H2 N-free with 10mM L-Valine
-3.6
N.D.
N.D.
N.D.
-0.3
nitrogen source
H2 N-free with 10mM L-Lysine
-4.0
N.D.
N.D.
N.D.
+0.1
nitrogen source
H2 N-free with 10mM L-Carnitine
-3.6
N.D.
N.D.
N.D.
-0.2
nitrogen source
H2 N-free with 10mM L-Carnitine
-3.6
N.D.
N.D.
N.D.
-0.3
nitrogen source
N2 fixation, H2 media
-4.0
N.D.
N.D.
N.D.
+0.2
nitrogen source
H2 N-free with 10mM L-Asparagine
-3.8
N.D.
N.D.
N.D.
+0.0
nitrogen source
H2 N-free with 10mM L-Arginine
-4.1
N.D.
N.D.
N.D.
+0.4
nitrogen source
H2 N-free with 10mM L-Proline
-3.7
N.D.
N.D.
N.D.
+0.1
nitrogen source
H2 N-free with 10mM Putrescine
-3.8
N.D.
N.D.
N.D.
+0.3
nitrogen source
H2 N-free with 10mM L-Proline
-3.7
N.D.
N.D.
N.D.
+0.3
nitrogen source
H2 N-free with 10mM Glycine
-3.8
N.D.
N.D.
N.D.
+0.5
nitrogen source
H2 N-free with 10mM L-Glutamic
-3.6
N.D.
N.D.
N.D.
+0.3
nitrogen source
N2 fixation, H2 media
-3.3
N.D.
N.D.
N.D.
+0.5
nitrogen source
H2 N-free with 2mM Adenosine
+2.9
N.D.
N.D.
N.D.
+1.1
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