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Homologs
Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS00450 and MMP_RS00455 are separated by 194 nucleotides
MMP_RS00455 and MMP_RS00460 are separated by 146 nucleotides
MMP_RS00460 and MMP_RS00465 are separated by 27 nucleotides
MMP_RS00465 and MMP_RS00470 are separated by 20 nucleotides
MMP_RS00450: MMP_RS00450 - 4Fe-4S binding protein, at 88,705 to 89,550
_RS00450
MMP_RS00455: MMP_RS00455 - orotate phosphoribosyltransferase-like protein, at 89,745 to 90,362
_RS00455
MMP_RS00460: MMP_RS00460 - glutamine amidotransferase family protein, at 90,509 to 91,600
_RS00460
MMP_RS00465: MMP_RS00465 - alpha-hydroxy-acid oxidizing protein, at 91,628 to 93,160
_RS00465
MMP_RS00470: MMP_RS00470 - hypothetical protein, at 93,181 to 93,951
_RS00470
Group
Condition
MMP
_RS00450
MMP
_RS00455
MMP
_RS00460
MMP
_RS00465
MMP
_RS00470
nutrient t2
Formate deepwell autotrophic conditions
-1.3
-4.7
N.D.
N.D.
N.D.
nutrient t2
Formate deepwell acetate and casamino FREE
-1.6
-4.0
N.D.
N.D.
N.D.
nutrient t2
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE
-2.4
-3.1
N.D.
N.D.
N.D.
nutrient t2
Formate deepwell autotrophic conditions
-1.1
-4.4
N.D.
N.D.
N.D.
nutrient t2
Formate deepwell autotrophic conditions
-0.8
-4.7
N.D.
N.D.
N.D.
stress
H2 McCas with 10 mM thiosulfate
-4.1
-1.1
N.D.
N.D.
N.D.
nutrient t2
Formate deepwell acetate and casamino FREE
-1.2
-3.8
N.D.
N.D.
N.D.
stress
H2 McCas with 0.1 mM sulfite
-3.6
-1.1
N.D.
N.D.
N.D.
stress
H2 McCas with 10 mM thiosulfate
-3.5
-1.2
N.D.
N.D.
N.D.
stress
H2 McCas with 10 mM thiosulfate
-3.5
-1.2
N.D.
N.D.
N.D.
nutrient t2
Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE
-1.3
-3.2
N.D.
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Histidine
+0.6
-5.0
N.D.
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Arginine
+0.6
-4.8
N.D.
N.D.
N.D.
nitrogen source
H2 N-free with 10mM Glycine
+0.4
-4.5
N.D.
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Methionine
+0.4
-4.2
N.D.
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Arginine
+0.7
-4.1
N.D.
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Ornithine
+0.7
-4.1
N.D.
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Histidine
+0.9
-4.3
N.D.
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Lysine
+0.8
-4.0
N.D.
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Asparagine
+0.9
-3.8
N.D.
N.D.
N.D.
nitrogen source
H2 N-free with 10mM Glycine
+1.1
-3.8
N.D.
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Carnitine
+1.2
-3.6
N.D.
N.D.
N.D.
nitrogen source
H2 N-free with 10mM D-glucosamine
+1.4
-3.4
N.D.
N.D.
N.D.
nitrogen source
H2 N-free with 10mM Gly-Glu
+1.3
-3.2
N.D.
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-Tryptophan
+1.6
-3.4
N.D.
N.D.
N.D.
nitrogen source
H2 N-free with 10mM D-glucosamine
+2.0
-3.1
N.D.
N.D.
N.D.
nitrogen source
H2 N-free with 10mM NAG
+2.2
-2.6
N.D.
N.D.
N.D.
nitrogen source
H2 N-free with 10mM Urea
+6.1
+1.0
N.D.
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-tyrosine
+8.8
-1.4
N.D.
N.D.
N.D.
nitrogen source
H2 N-free with 10mM L-tyrosine
+12.0
-0.2
N.D.
N.D.
N.D.
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