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Fitness for 5 genes in
Methanococcus maripaludis S2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
MMP_RS00360 and MMP_RS00365 are separated by 94 nucleotides
MMP_RS00365 and MMP_RS00370 are separated by 391 nucleotides
MMP_RS00370 and MMP_RS00375 are separated by 26 nucleotides
MMP_RS00375 and MMP_RS00380 are separated by 103 nucleotides
MMP_RS00360: MMP_RS00360 - 50S ribosomal protein L31e, at 75,129 to 75,380
_RS00360
MMP_RS00365: MMP_RS00365 - acetylglutamate kinase, at 75,475 to 76,359
_RS00365
MMP_RS00370: MMP_RS00370 - P-II family nitrogen regulator, at 76,751 to 77,089
_RS00370
MMP_RS00375: MMP_RS00375 - ammonium transporter, at 77,116 to 78,342
_RS00375
MMP_RS00380: MMP_RS00380 - P-II family nitrogen regulator, at 78,446 to 78,784
_RS00380
Group
Condition
MMP
_RS00360
MMP
_RS00365
MMP
_RS00370
MMP
_RS00375
MMP
_RS00380
nitrogen source
H2 N-free with 10mM D-glucosamine
N.D.
N.D.
N.D.
-2.7
+0.1
nitrogen source
H2 N-free with 10mM D-glucosamine
N.D.
N.D.
N.D.
-2.7
+0.2
nitrogen source
H2 N-free with 2mM Adenosine
N.D.
N.D.
N.D.
-1.4
-1.0
nitrogen source
H2 N-free with 10mM D-glucosamine
N.D.
N.D.
N.D.
-2.3
+0.1
nutrient t2
H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE
N.D.
N.D.
N.D.
-0.1
-1.6
nitrogen source
H2 N-free with 10mM L-Alanine
N.D.
N.D.
N.D.
-2.1
+0.6
nitrogen source
H2 N-free with 10mM L-Alanine
N.D.
N.D.
N.D.
-1.9
+0.6
nitrogen source
H2 N-free with 10mM L-Alanine
N.D.
N.D.
N.D.
-1.6
+0.4
nitrogen source
H2 N-free with 10mM D-Alanine
N.D.
N.D.
N.D.
-1.8
+0.6
nitrogen source
H2 N-free with 10mM D-Alanine
N.D.
N.D.
N.D.
-1.4
+0.3
nitrogen source
H2 N-free with 10mM D-Alanine
N.D.
N.D.
N.D.
-1.7
+0.6
nitrogen source
H2 N-free with 10mM L-Glutamine
N.D.
N.D.
N.D.
-1.4
+0.4
nitrogen source
H2 N-free with 2mM Adenine
N.D.
N.D.
N.D.
-1.3
+0.3
nitrogen source
H2 N-free with 10mM L-Glutamine
N.D.
N.D.
N.D.
-1.2
+0.4
stress
McCas_H2_complete Thioridazine 0.1 mM
N.D.
N.D.
N.D.
+0.5
-1.0
stress
McCas_H2_complete Chloride 250 mM
N.D.
N.D.
N.D.
+0.8
-0.9
nitrogen source
H2 N-free with 10mM Thymidine
N.D.
N.D.
N.D.
+1.1
+0.5
stress
McCas_H2_complete sodium bromide 250 mM
N.D.
N.D.
N.D.
-0.0
+1.7
nitrogen source
H2 N-free with 10mM L-Glutamic
N.D.
N.D.
N.D.
+1.3
+0.3
nitrogen source
H2 N-free with 10mM Gly-D-Asp
N.D.
N.D.
N.D.
+1.0
+0.9
nitrogen source
H2 N-free with 10mM Gly-Glu
N.D.
N.D.
N.D.
+2.1
-0.2
nitrogen source
H2 N-free with 10mM L-Aspartic Acid
N.D.
N.D.
N.D.
+1.7
+0.3
nitrogen source
H2 N-free with 10mM Glycine
N.D.
N.D.
N.D.
+2.3
-0.2
nitrogen source
H2 N-free with 10mM L-Arginine
N.D.
N.D.
N.D.
+2.0
+0.3
nitrogen source
H2 N-free with 10mM NAG
N.D.
N.D.
N.D.
+2.9
-0.1
stress
McCas_H2_complete Cesium chloride 41.6666666666667 mM
N.D.
N.D.
N.D.
+3.5
-0.6
nitrogen source
H2 N-free with 10mM NAG
N.D.
N.D.
N.D.
+2.7
+0.3
stress
McCas_H2_complete bromate 50 mM
N.D.
N.D.
N.D.
+3.7
-0.5
nitrogen source
H2 N-free with 5mM Inosine
N.D.
N.D.
N.D.
+5.2
-0.5
nitrogen source
H2 N-free with 5mM Inosine
N.D.
N.D.
N.D.
+5.2
+0.0
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