Fitness for 5 genes in Methanococcus maripaludis S2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 700 experiments or choose conditions or try the comparative fitness browser

500 ntMMP_RS00285 and MMP_RS00290 are separated by 57 nucleotidesMMP_RS00290 and MMP_RS00295 are separated by 38 nucleotidesMMP_RS00295 and MMP_RS00300 are separated by 48 nucleotidesMMP_RS00300 and MMP_RS00305 are separated by 37 nucleotides MMP_RS00285: MMP_RS00285 - TIGR04013 family B12-binding domain/radical SAM domain-containing protein, at 64,389 to 65,498 _RS00285 MMP_RS00290: MMP_RS00290 - hypothetical protein, at 65,556 to 65,828 _RS00290 MMP_RS00295: MMP_RS00295 - gamma carbonic anhydrase family protein, at 65,867 to 66,322 _RS00295 MMP_RS00300: MMP_RS00300 - 6 7-dimethyl-8-ribityllumazine synthase, at 66,371 to 66,784 _RS00300 MMP_RS00305: MMP_RS00305 - phosphoribosyl-ATP diphosphatase, at 66,822 to 67,112 _RS00305
Group Condition MMP_RS00285 MMP_RS00290 MMP_RS00295 MMP_RS00300 MMP_RS00305
nutrient t2 Formate deepwell autotrophic conditions +0.1 -4.8 -6.5 -4.8 -5.5
nutrient t2 Formate deepwell autotrophic conditions +0.1 -5.1 -4.9 -4.9 -5.5
nutrient t2 Formate deepwell autotrophic conditions -0.0 -4.6 -5.8 -4.7 -4.2
nutrient t2 Formate deepwell vitamin and casamino FREE +0.2 -3.7 -5.2 -4.7 -5.3
nutrient t2 Formate deepwell acetate and casamino FREE +0.1 -3.4 -4.8 -4.9 -4.3
nutrient t1 Formate deepwell casamino FREE +0.1 -3.2 -4.8 -4.9 -4.4
nutrient t1 Formate deepwell casamino FREE +0.2 -3.5 -4.5 -5.0 -4.3
nutrient t2 Formate deepwell acetate and casamino FREE +0.1 -3.3 -4.4 -5.0 -4.0
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE +0.0 -2.6 -4.2 -4.5 -5.2
nutrient t2 Formate deepwell vitamin and casamino FREE +0.2 -3.5 -3.6 -4.8 -4.6
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE +0.2 -2.5 -3.9 -5.7 -4.4
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE +0.0 -2.7 -4.3 -5.6 -3.5
nutrient t1 Formate deepwell casamino FREE +0.2 -2.9 -4.2 -5.0 -4.3
nutrient t2 Formate deepwell acetate and casamino FREE +0.1 -3.2 -4.3 -4.9 -3.7
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -0.0 -2.7 -4.2 -3.5 -5.4
nutrient t2 Formate deepwell vitamin and casamino FREE +0.2 -3.9 -3.9 -3.6 -4.3
formate no stress control Formate no stress control +0.1 -1.1 -1.7 -6.1 -6.6
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE +0.1 -1.4 -2.8 -5.6 -5.7
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE +0.0 -3.1 -3.9 -4.4 -3.9
nutrient t1 Formate deepwell vitamin FREE +0.1 -1.8 -3.3 -5.0 -4.9
nutrient t1 Formate deepwell vitamin FREE +0.1 -2.0 -2.8 -5.1 -5.1
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE +0.3 -2.4 -3.7 -5.4 -3.4
nutrient t2 Formate deepwell acetate and vitamin FREE +0.1 -1.2 -2.7 -4.9 -5.6
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE +0.1 -3.6 -3.7 -4.3 -2.7
nutrient t2 Formate deepwell acetate and vitamin FREE +0.0 -1.1 -2.5 -4.9 -5.6
nutrient t2 Formate deepwell acetate FREE -0.1 -1.5 -2.4 -4.8 -5.3
rich t2 Formate McCas deepwell complete +0.0 -1.5 -2.9 -5.0 -4.4
nutrient t1 Formate deepwell autotrophic conditions +0.2 -2.7 -4.2 -4.8 -2.2
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE +0.4 -1.9 -3.1 -3.7 -4.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations +0.3 +0.6 +0.7 -5.9 -6.2
remove
MMP_RS00285
plot
remove
MMP_RS00290
plot
remove
MMP_RS00295
remove
MMP_RS00300
plot
remove
MMP_RS00305
plot