Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS00130 and MMP_RS00135 are separated by 116 nucleotidesMMP_RS00135 and MMP_RS00140 are separated by 4 nucleotidesMMP_RS00140 and MMP_RS00145 overlap by 4 nucleotidesMMP_RS00145 and MMP_RS00150 are separated by 179 nucleotides MMP_RS00130: MMP_RS00130 - nickel-responsive transcriptional regulator NikR, at 28,989 to 29,414 _RS00130 MMP_RS00135: MMP_RS00135 - DUF2121 domain-containing protein, at 29,531 to 30,406 _RS00135 MMP_RS00140: MMP_RS00140 - DUF192 domain-containing protein, at 30,411 to 30,746 _RS00140 MMP_RS00145: MMP_RS00145 - ATP-dependent Clp protease proteolytic subunit, at 30,743 to 31,567 _RS00145 MMP_RS00150: MMP_RS00150 - AAA family ATPase, at 31,747 to 32,862 _RS00150
Group Condition MMP_RS00130 MMP_RS00135 MMP_RS00140 MMP_RS00145 MMP_RS00150
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations -6.7 -1.1 -0.1 -0.8 +0.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations -6.7 -1.4 +0.0 -0.6 +0.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations -6.3 -1.4 -0.2 -0.3 +0.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 10 generations -7.0 -0.5 -0.2 -0.1 -0.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 10 generations -6.9 -0.3 +0.4 -0.1 +0.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 10 generations -5.7 -0.2 -0.1 +0.1 -0.2
stress McCas_H2_complete metavanadate 4.54545454545455 mM -3.5 -0.3 -1.5 -0.2 -0.5
stress Formate McCas no stress control 2 -5.3 -0.2 +0.1 -0.0 -0.5
stress McCas_formate_complete NO 0.025 mM -5.2 +0.2 -0.9 -0.2 +0.2
nutrient t2 Formate deepwell acetate FREE -5.6 -0.1 +0.2 +0.2 -0.6
stress McCas_H2_complete gold (III) chloride 0.0357142857142857 mM -4.4 -0.6 -0.2 -0.1 -0.4
stress McCas_H2_complete 2-bromoethanesulfonic 0.00833333333333333 mM -3.2 -0.6 -0.6 -0.3 -1.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations -5.0 -0.7 +0.0 -0.1 +0.1
nutrient t2 H2 deepwell acetate and vitamin FREE -3.6 -0.3 -1.0 -0.1 -0.2
stress McCas_H2_complete Spiramycin 0.1 mM -4.1 +0.4 -0.8 -0.1 -0.3
stress McCas_formate_complete NO 0.025 mM -3.5 -0.3 -0.4 -0.8 +0.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations -4.2 -0.9 +0.5 -0.1 -0.0
nutrient t2 H2 deepwell acetate and casamino FREE -5.2 -0.4 +0.7 +0.3 -0.1
stress Formate 100 mM hypophosphite -3.6 -0.7 +0.2 -0.7 +0.6
stress McCas_formate_complete Rifampicin 0.5 mM -4.4 +0.4 +0.3 -0.2 +0.1
nutrient t2 H2 deepwell vitamin and casamino FREE -4.6 -0.2 +0.7 +0.1 +0.2
nutrient t2 H2 deepwell acetate and casamino FREE -3.8 -0.1 +0.8 +0.2 +0.3
nutrient t2 H2 deepwell vitamin and casamino FREE -3.8 +0.1 +0.8 +0.1 +0.4
stress McCas_formate_complete 3-nitroxypropanol 0.00833333333333333 mM -2.0 +0.9 -1.0 -0.6 +1.2
nutrient t2 H2 deepwell autotrophic conditions -3.4 +0.3 +1.1 +0.7 +0.3
stress McCas_H2_complete sulfate 125 mM +3.0 +0.1 -1.4 -0.0 -0.5
stress H2 50 mM hypophosphite +2.5 +0.6 +0.4 +0.1 -1.7
stress McCas_H2_complete nitrate 35.7142857142857 mM +4.2 -0.1 -1.3 -0.1 -0.3
stress Formate with nitrate 62.5 mM +2.9 +0.5 +0.2 -1.0 +0.5
nitrogen source H2 N-free with 10mM Gly-D-Asp +5.1 +0.1 +0.1 -0.0 +0.2
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