Fitness for 5 genes in Methanococcus maripaludis S2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 700 experiments or choose conditions or try the comparative fitness browser

500 ntMMP_RS00115 and MMP_RS00120 are separated by 72 nucleotidesMMP_RS00120 and MMP_RS00125 are separated by 29 nucleotidesMMP_RS00125 and MMP_RS00130 are separated by 91 nucleotidesMMP_RS00130 and MMP_RS00135 are separated by 116 nucleotides MMP_RS00115: MMP_RS00115 - radical SAM protein, at 26,673 to 27,725 _RS00115 MMP_RS00120: MMP_RS00120 - LysR family transcriptional regulator, at 27,798 to 28,640 _RS00120 MMP_RS00125: MMP_RS00125 - DUF2798 domain-containing protein, at 28,670 to 28,897 _RS00125 MMP_RS00130: MMP_RS00130 - nickel-responsive transcriptional regulator NikR, at 28,989 to 29,414 _RS00130 MMP_RS00135: MMP_RS00135 - DUF2121 domain-containing protein, at 29,531 to 30,406 _RS00135
Group Condition MMP_RS00115 MMP_RS00120 MMP_RS00125 MMP_RS00130 MMP_RS00135
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations -1.9 -10.5 -0.6 -6.7 -1.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations -1.4 -11.2 -0.1 -5.0 -0.7
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations -0.9 -9.9 +0.2 -6.3 -1.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations -1.2 -7.1 -0.3 -6.7 -1.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations -2.3 -6.0 -0.2 -4.2 -0.9
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations -1.6 -6.2 +0.3 -3.3 -0.7
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 10 generations -0.7 -3.0 -0.1 -7.0 -0.5
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations -1.6 -5.8 -0.0 -2.2 -1.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 10 generations +0.1 -2.5 -0.2 -6.9 -0.3
stress McCas_H2_complete gold (III) chloride 0.0357142857142857 mM -2.1 -0.9 -1.7 -4.4 -0.6
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations -1.6 -4.1 -0.6 -2.6 -0.6
stress Formate with hypochlorite 5 mM -2.8 -3.5 +0.0 -2.9 -0.1
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 10 generations -0.6 -2.5 -0.3 -5.7 -0.2
nutrient t2 H2 deepwell acetate and vitamin FREE -3.0 -2.1 -1.2 -2.4 -0.4
nutrient t2 H2 deepwell acetate and vitamin FREE -3.3 -1.7 -0.1 -3.6 -0.3
stress Formate 100 mM hypophosphite -1.8 -2.8 -0.2 -3.6 -0.4
stress Formate with hypochlorite 5 mM -2.9 -3.5 +0.1 -2.1 -0.2
stress Formate 100 mM hypophosphite -2.2 -2.1 -0.1 -3.6 -0.7
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -3.4 -1.7 +0.4 -3.5 -0.2
nutrient t2 Formate deepwell acetate FREE -3.0 -0.7 +1.4 -5.6 -0.1
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -4.4 -0.9 -0.2 -2.1 -0.3
stress McCas_formate_complete NO 0.025 mM -2.8 -0.6 +0.7 -5.2 +0.2
nutrient t2 H2 deepwell acetate and casamino FREE -1.5 -0.7 +0.7 -5.2 -0.4
stress McCas_formate_complete NO 0.025 mM -2.9 -0.8 +0.5 -3.5 -0.3
nutrient t2 H2 deepwell vitamin and casamino FREE -2.0 -0.9 +0.7 -4.6 -0.2
stress McCas_formate_complete Rifampicin 0.5 mM -3.3 +0.4 +0.9 -4.4 +0.4
nutrient t2 H2 deepwell vitamin and casamino FREE -2.2 -1.0 +1.1 -3.8 +0.1
stress Formate McCas no stress control 2 -1.5 -0.2 +1.6 -5.3 -0.2
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM -1.6 +0.5 +3.5 -2.4 +0.6
stress Formate with nitrate 62.5 mM -1.6 +2.1 +1.1 +2.9 +0.5
remove
MMP_RS00115
plot
remove
MMP_RS00120
plot
remove
MMP_RS00125
remove
MMP_RS00130
plot
remove
MMP_RS00135
plot