Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS00110 and MMP_RS00115 are separated by 120 nucleotidesMMP_RS00115 and MMP_RS00120 are separated by 72 nucleotidesMMP_RS00120 and MMP_RS00125 are separated by 29 nucleotidesMMP_RS00125 and MMP_RS00130 are separated by 91 nucleotides MMP_RS00110: MMP_RS00110 - hypothetical protein, at 26,061 to 26,552 _RS00110 MMP_RS00115: MMP_RS00115 - radical SAM protein, at 26,673 to 27,725 _RS00115 MMP_RS00120: MMP_RS00120 - LysR family transcriptional regulator, at 27,798 to 28,640 _RS00120 MMP_RS00125: MMP_RS00125 - DUF2798 domain-containing protein, at 28,670 to 28,897 _RS00125 MMP_RS00130: MMP_RS00130 - nickel-responsive transcriptional regulator NikR, at 28,989 to 29,414 _RS00130
Group Condition MMP_RS00110 MMP_RS00115 MMP_RS00120 MMP_RS00125 MMP_RS00130
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations -7.0 -1.9 -10.5 -0.6 -6.7
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations -7.7 -1.4 -11.2 -0.1 -5.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 20 generations -6.4 -0.9 -9.9 +0.2 -6.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations -7.0 -1.2 -7.1 -0.3 -6.7
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations -7.0 -2.3 -6.0 -0.2 -4.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse2; 20 generations -7.6 -1.6 -6.2 +0.3 -3.3
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse3; 20 generations -7.7 -1.6 -5.8 -0.0 -2.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations -7.6 -1.6 -4.1 -0.6 -2.6
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 10 generations -4.7 -0.7 -3.0 -0.1 -7.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations -7.7 -1.7 -3.5 -0.1 -1.5
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -6.5 -4.4 -0.9 -0.2 -2.1
nutrient t2 H2 deepwell acetate and vitamin FREE -5.3 -3.3 -1.7 -0.1 -3.6
nutrient t2 H2 deepwell acetate and vitamin FREE -5.3 -3.0 -2.1 -1.2 -2.4
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 10 generations -4.3 -0.6 -2.5 -0.3 -5.7
stress H2 McCas with 1 mM (NH4)2S control -7.3 -2.8 -0.5 -0.7 -1.5
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -5.4 -4.0 -1.8 -0.1 -1.3
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -4.4 -3.4 -1.7 +0.4 -3.5
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse3; 10 generations -2.7 +0.1 -2.5 -0.2 -6.9
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -6.2 -3.8 -0.6 -0.2 -1.2
rich t2 H2 McCas deepwell complete -5.8 -3.3 -0.7 -0.2 -2.0
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -5.8 -3.9 -0.6 -0.3 -1.4
nutrient t2 H2 deepwell vitamin and casamino FREE -5.3 -2.0 -0.9 +0.7 -4.6
nutrient t2 H2 deepwell acetate FREE -6.2 -2.7 -1.8 -0.1 -1.2
nutrient t2 H2 deepwell acetate and vitamin FREE -4.8 -2.7 -1.3 -0.8 -2.4
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -4.9 -3.0 -2.1 +0.1 -2.0
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -5.4 -3.8 -0.1 -0.3 -2.0
stress McCas_formate_complete NO 0.025 mM -4.3 -2.9 -0.8 +0.5 -3.5
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -6.0 -5.0 +0.3 +0.2 -0.2
nutrient t2 H2 deepwell vitamin FREE -5.7 -3.0 -0.6 +1.1 -2.2
nutrient t2 H2 deepwell vitamin and casamino FREE -3.8 -2.2 -1.0 +1.1 -3.8
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