Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS00060 and MMP_RS00065 are separated by 381 nucleotidesMMP_RS00065 and MMP_RS00070 are separated by 28 nucleotidesMMP_RS00070 and MMP_RS00075 are separated by 10 nucleotidesMMP_RS00075 and MMP_RS00080 are separated by 26 nucleotides MMP_RS00060: MMP_RS00060 - 3-dehydroquinate synthase II, at 15,336 to 16,421 _RS00060 MMP_RS00065: MMP_RS00065 - geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase, at 16,803 to 17,573 _RS00065 MMP_RS00070: MMP_RS00070 - DNA-directed DNA polymerase II small subunit, at 17,602 to 19,359 _RS00070 MMP_RS00075: MMP_RS00075 - hypothetical protein, at 19,370 to 20,479 _RS00075 MMP_RS00080: MMP_RS00080 - RecB-family nuclease, at 20,506 to 20,931 _RS00080
Group Condition MMP_RS00060 MMP_RS00065 MMP_RS00070 MMP_RS00075 MMP_RS00080
stress McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM -5.1 N.D. N.D. N.D. +0.5
nitrogen source H2 N-free with 5mM Inosine -4.2 N.D. N.D. N.D. -0.0
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations -3.0 N.D. N.D. N.D. -0.0
nutrient t2 H2 deepwell acetate and casamino FREE -1.5 N.D. N.D. N.D. -0.8
stress H2 McCas with 10 mM (NH4)2S -1.7 N.D. N.D. N.D. -0.5
stress H2 McCas with 0.1 mM (NH4)2S -2.3 N.D. N.D. N.D. +0.2
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 10 generations -2.0 N.D. N.D. N.D. -0.1
nitrogen source H2 N-free with 10mM Glycine -1.7 N.D. N.D. N.D. -0.4
iron Iron excess (5x) , H2 media -1.8 N.D. N.D. N.D. -0.2
nutrient t2 Formate deepwell acetate FREE -2.5 N.D. N.D. N.D. +0.5
nutrient t2 H2 deepwell autotrophic conditions -1.3 N.D. N.D. N.D. -0.7
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse1; 20 generations -2.1 N.D. N.D. N.D. +0.1
rich t2 H2 McCas deepwell complete -1.7 N.D. N.D. N.D. -0.2
stress McCas_formate_complete mercury (II) chloride 0.227272727272727 mM -1.9 N.D. N.D. N.D. +0.0
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -1.6 N.D. N.D. N.D. -0.3
stress McCas_H2_complete Benzethonium chloride 0.003125 mM -2.0 N.D. N.D. N.D. +0.1
nitrogen source H2 N-free with 10mM Ammonium chloride -2.0 N.D. N.D. N.D. +0.2
stress McCas_formate_complete 3-nitroxypropanol 0.000416666666666667 mM -2.0 N.D. N.D. N.D. +0.2
stress McCas_H2_complete Nitrofurantoin 0.1 mM -1.8 N.D. N.D. N.D. +0.4
stress McCas_H2_complete 5-Fluorouracil 0.00833333333333333 mM +0.5 N.D. N.D. N.D. -1.9
stress H2 McCas with 0.1 mM sulfite -1.7 N.D. N.D. N.D. +0.5
nitrogen source H2 N-free with 10mM L-Arginine -1.5 N.D. N.D. N.D. +0.5
stress McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM -1.7 N.D. N.D. N.D. +0.9
stress H2 McCas with 10 mM thiosulfate -1.2 N.D. N.D. N.D. +0.8
nutrient t2 H2 deepwell acetate FREE -1.1 N.D. N.D. N.D. +1.0
stress McCas_formate_complete nitrate 35.7142857142857 mM +1.2 N.D. N.D. N.D. +0.7
stress McCas_H2_complete Hydroxylamine 1.04166666666667 mM +0.1 N.D. N.D. N.D. +1.9
no stress control McCas_H2_complete no stress control +1.1 N.D. N.D. N.D. +1.0
stress McCas_H2_complete 5-Fluorouracil 0.00833333333333333 mM +1.9 N.D. N.D. N.D. +0.3
stress McCas_H2_complete Cadmium chloride hemipentahydrate 0.555555555555556 mM +3.4 N.D. N.D. N.D. +2.6
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