Fitness for 5 genes in Methanococcus maripaludis S2

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500 ntMMP_RS00045 and MMP_RS00050 are separated by 38 nucleotidesMMP_RS00050 and MMP_RS00055 are separated by 81 nucleotidesMMP_RS00055 and MMP_RS00060 are separated by 127 nucleotidesMMP_RS00060 and MMP_RS00065 are separated by 381 nucleotides MMP_RS00045: MMP_RS00045 - 2-oxoacid:acceptor oxidoreductase subunit alpha, at 11,517 to 12,608 _RS00045 MMP_RS00050: MMP_RS00050 - AarF/UbiB family protein, at 12,647 to 13,543 _RS00050 MMP_RS00055: MMP_RS00055 - DUF2254 domain-containing protein, at 13,625 to 15,208 _RS00055 MMP_RS00060: MMP_RS00060 - 3-dehydroquinate synthase II, at 15,336 to 16,421 _RS00060 MMP_RS00065: MMP_RS00065 - geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase, at 16,803 to 17,573 _RS00065
Group Condition MMP_RS00045 MMP_RS00050 MMP_RS00055 MMP_RS00060 MMP_RS00065
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanolamine_timecourse2; 20 generations N.D. -2.9 +0.2 -3.0 N.D.
nitrogen source H2 N-free with 5mM Inosine N.D. -0.3 -1.0 -4.2 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. -3.8 -0.2 -1.4 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. -3.6 -0.1 -1.6 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. -3.9 -0.0 -1.4 N.D.
stress McCas_H2_complete 2,2-dibromo-2-cyanoacetamide 0.0333333333333333 mM N.D. -0.0 +0.1 -5.1 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. -4.3 -0.0 -0.5 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 N.D. -3.8 +0.1 -1.0 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 N.D. -3.3 +0.0 -1.3 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. -3.3 +0.0 -1.1 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. -3.2 -0.1 -1.0 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 N.D. -3.2 +0.1 -1.1 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse1; 20 generations N.D. -2.9 +0.1 -1.5 N.D.
stress H2 McCas with 0.1 mM (NH4)2S N.D. -1.4 -0.2 -2.3 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse3; 20 generations N.D. -2.8 +0.2 -1.1 N.D.
stress H2 McCas with 10 mM (NH4)2S N.D. -2.0 -0.0 -1.7 N.D.
rich t2 H2 McCas deepwell complete N.D. -2.1 +0.2 -1.7 N.D.
nutrient t2 Formate deepwell acetate FREE N.D. -1.5 +0.4 -2.5 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; 1,3-Propanediol_timecourse1; 20 generations N.D. -2.5 +0.0 -1.0 N.D.
rich t1 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. -2.1 -0.0 -1.4 N.D.
nutrient t1 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. -2.0 -0.1 -1.4 N.D.
stress H2 McCas with 1 mM (NH4)2S control N.D. -2.1 -0.0 -1.3 N.D.
iron Iron excess (5x) , H2 media N.D. -1.4 -0.3 -1.8 N.D.
mixed community Mixed culture; Syntrophotalea carbinolica 1:1 starting OD to methanogen; Ethanol_timecourse2; 20 generations N.D. -2.4 +0.1 -1.1 N.D.
stress H2 McCas with 20 minute oxygen exposure N.D. -1.8 +0.1 -1.7 N.D.
nutrient t2 H2 deepwell acetate and vitamin FREE N.D. -2.1 +0.1 -1.3 N.D.
nutrient t2 H2 deepwell acetate FREE N.D. -2.1 +0.2 -1.1 N.D.
stress McCas_H2_complete Cadmium chloride hemipentahydrate 0.555555555555556 mM N.D. -0.5 +0.1 +3.4 N.D.
stress McCas_H2_complete Benzethonium chloride 0.00625 mM N.D. +2.7 -0.3 +1.1 N.D.
stress McCas_H2_complete Benzethonium chloride 0.00625 mM N.D. +2.7 -0.3 +1.3 N.D.
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