Fitness for 5 genes in Methanococcus maripaludis JJ

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500 ntMMJJ_RS06700 and MMJJ_RS06705 are separated by 91 nucleotidesMMJJ_RS06705 and MMJJ_RS09325 are separated by 31 nucleotidesMMJJ_RS09325 and MMJJ_RS06710 are separated by 12 nucleotidesMMJJ_RS06710 and MMJJ_RS06715 are separated by 47 nucleotides MMJJ_RS06700: MMJJ_RS06700 - L-seryl-tRNA(Sec) kinase, at 1,235,874 to 1,236,641 _RS06700 MMJJ_RS06705: MMJJ_RS06705 - bifunctional NADP phosphatase/NAD kinase, at 1,236,733 to 1,238,433 _RS06705 MMJJ_RS09325: MMJJ_RS09325 - hypothetical protein, at 1,238,465 to 1,238,623 _RS09325 MMJJ_RS06710: MMJJ_RS06710 - TldD/PmbA family protein, at 1,238,636 to 1,240,012 _RS06710 MMJJ_RS06715: MMJJ_RS06715 - lactaldehyde dehydrogenase, at 1,240,060 to 1,241,457 _RS06715
Group Condition MMJJ_RS06700 MMJJ_RS06705 MMJJ_RS09325 MMJJ_RS06710 MMJJ_RS06715
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -3.5 -3.0 +0.4 +0.2 -3.8
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -3.7 -2.7 +0.6 +0.4 -4.1
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -3.3 -3.0 +0.6 +0.4 -4.1
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -3.6 -3.2 +0.7 +0.4 -3.6
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -3.6 -2.3 +0.8 +0.4 -4.0
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -3.0 -2.7 +0.5 +0.1 -3.6
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -2.2 -3.6 +0.6 +0.4 -3.8
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -3.0 -2.1 -0.1 +0.3 -3.5
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -3.5 -2.0 +0.5 +0.2 -3.3
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -3.7 -1.7 +0.4 +0.4 -3.3
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -3.1 -1.4 -0.1 +0.4 -3.5
iron Iron excess (2.5x) , H2 media -3.7 -2.3 +0.8 +0.4 -2.8
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE -2.5 -3.4 +0.6 +0.4 -2.6
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -2.8 -2.5 +0.7 +0.3 -3.2
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -3.1 -1.9 +0.5 +0.2 -3.1
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE -2.7 -2.3 +0.6 +0.4 -3.2
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -2.7 -1.6 -0.1 +0.4 -3.3
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -2.8 -2.0 +0.5 +0.5 -3.4
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -3.2 -2.2 +0.9 -0.0 -2.7
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -3.4 -1.9 +0.3 +0.4 -2.3
nitrogen source H2 N-free with 2g/L casaminos -2.9 -3.1 +0.4 +0.3 -1.5
iron Iron excess (2.5x) , H2 media -3.0 -2.2 +0.6 +0.5 -2.7
nitrogen source H2 N-free with 2g/L casaminos 10mM Ammonium chloride -2.4 -3.5 +0.7 +0.5 -2.0
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -1.8 -2.5 +0.5 +0.8 -3.6
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -2.6 -2.2 +0.3 +0.5 -2.5
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -3.0 -1.8 +0.4 +0.4 -2.5
iron Iron excess (2.5x) , H2 media -2.7 -2.8 +0.8 +0.4 -2.2
nitrogen source H2 N-free with 2g/L casaminos 10mM Ammonium chloride -2.9 -2.3 +0.4 +0.4 -1.9
nitrogen source H2 N-free with 2g/L casaminos -3.0 -2.3 +0.4 +0.5 -1.7
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -2.4 -1.8 +0.7 +0.4 -2.9
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