Fitness for 5 genes in Methanococcus maripaludis JJ

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500 ntMMJJ_RS08555 and MMJJ_RS08560 are separated by 54 nucleotidesMMJJ_RS08560 and MMJJ_RS08565 are separated by 44 nucleotidesMMJJ_RS08565 and MMJJ_RS08570 are separated by 126 nucleotidesMMJJ_RS08570 and MMJJ_RS08575 are separated by 140 nucleotides MMJJ_RS08555: MMJJ_RS08555 - redox-regulated ATPase YchF, at 1,574,916 to 1,576,094 _RS08555 MMJJ_RS08560: MMJJ_RS08560 - metal-dependent phosphohydrolase, at 1,576,149 to 1,576,712 _RS08560 MMJJ_RS08565: MMJJ_RS08565 - ATP-binding protein, at 1,576,757 to 1,578,601 _RS08565 MMJJ_RS08570: MMJJ_RS08570 - multidrug resistance efflux transporter family protein, at 1,578,728 to 1,579,672 _RS08570 MMJJ_RS08575: MMJJ_RS08575 - hypothetical protein, at 1,579,813 to 1,580,109 _RS08575
Group Condition MMJJ_RS08555 MMJJ_RS08560 MMJJ_RS08565 MMJJ_RS08570 MMJJ_RS08575
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -1.5 +0.1 +0.3 +0.2 -5.4
stress McCas_formate_complete Polymyxin B sulfate 0.05 mM -0.5 +0.2 +0.2 -0.2 -4.8
stress McCas_formate_complete Polymyxin B sulfate 0.05 mM -0.2 +0.1 +0.0 +0.0 -4.4
iron control, 1x iron with casaminos and vitamins, H2 media -0.1 +0.1 +0.2 +0.0 -4.4
stress McCas_formate_complete Rifampicin 0.25 mM -0.6 -0.4 +0.1 -0.4 -2.8
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM -0.7 -1.1 +0.1 -0.2 -2.2
no stress control McCas_formate_complete no stress control -0.5 -0.2 +0.0 -0.5 -2.9
stress McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.00833333333333333 mM -0.7 -0.1 -0.0 -0.1 -2.9
iron Iron limitation (0.2x), H2 media -0.1 +0.1 +0.1 +0.1 -4.0
stress McCas_formate_complete deta nonoate 0.025 mM -0.3 -0.0 +0.1 +0.1 -3.7
nitrogen source Formate N-free with 2mM Adenosine -0.7 -0.1 -0.3 -0.5 -2.2
stress McCas_formate_complete Antimycin A 0.01 mM -1.1 +0.3 +0.1 +0.2 -2.8
nitrogen source Formate N-free with 2mM Adenosine -0.6 -0.1 +0.1 -0.1 -2.7
stress McCas_formate_complete phosphite 25 mM +0.1 -0.2 +0.1 -0.0 -3.2
iron control, 1x iron with casaminos and vitamins, H2 media -0.2 -0.0 -0.1 +0.1 -3.1
stress McCas_formate_complete phosphite 25 mM -0.6 -0.3 +0.0 +0.2 -2.6
stress McCas_formate_complete 3-nitroxypropanol 0.00208333333333333 mM -0.3 -0.2 -0.2 -0.4 -2.2
iron Iron limitation (0.2x), H2 media -0.1 +0.0 -0.0 -0.1 -3.0
planktonic H2 pooled triplicate planktonic cells -0.2 -0.6 +0.0 +0.3 -2.5
iron Iron excess (2.5x) , H2 media +0.4 -0.0 +0.1 -0.0 -3.5
stress McCas_formate_complete Irgasan 0.0125 mM -0.6 +0.5 +0.1 -0.2 -2.7
nitrogen source N2 fixation, H2 media +0.0 -0.5 +0.1 +0.1 -2.7
no stress control McCas_formate_complete no stress control -0.4 -0.3 +0.2 +0.0 -2.4
stress McCas_formate_complete sodium bromide 125 mM -0.6 +0.1 +0.0 +0.2 -2.6
iron Iron limitation (0.2x), H2 media -0.1 +0.2 +0.2 -0.1 -2.9
nitrogen source H2 N-free with 2g/L casaminos 10mM Ammonium chloride -0.1 -0.1 +0.1 +0.1 -2.8
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -0.5 -0.5 +0.2 +0.3 -2.1
nitrogen source H2 N-free with 2mM Adenosine -0.3 +0.2 +0.1 +0.1 -2.6
nitrogen source H2 N-free with 2g/L casaminos 10mM Ammonium chloride +0.1 +0.1 +0.2 +0.1 -2.9
stress McCas_formate_complete Anhydrotetracycline 0.05 mM -0.8 +0.2 +0.3 +0.1 -2.2
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