Fitness for 5 genes in Methanococcus maripaludis JJ

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500 ntMMJJ_RS08470 and MMJJ_RS08475 are separated by 175 nucleotidesMMJJ_RS08475 and MMJJ_RS08480 overlap by 11 nucleotidesMMJJ_RS08480 and MMJJ_RS08485 are separated by 204 nucleotidesMMJJ_RS08485 and MMJJ_RS08490 are separated by 199 nucleotides MMJJ_RS08470: MMJJ_RS08470 - ferredoxin family protein, at 1,559,297 to 1,559,542 _RS08470 MMJJ_RS08475: MMJJ_RS08475 - thiamine phosphate synthase, at 1,559,718 to 1,560,341 _RS08475 MMJJ_RS08480: MMJJ_RS08480 - hydroxyethylthiazole kinase, at 1,560,331 to 1,561,131 _RS08480 MMJJ_RS08485: MMJJ_RS08485 - Lrp/AsnC family transcriptional regulator, at 1,561,336 to 1,561,758 _RS08485 MMJJ_RS08490: MMJJ_RS08490 - rubrerythrin family protein, at 1,561,958 to 1,562,377 _RS08490
Group Condition MMJJ_RS08470 MMJJ_RS08475 MMJJ_RS08480 MMJJ_RS08485 MMJJ_RS08490
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM -3.2 N.D. -1.8 -0.1 -1.4
stress McCas_formate_complete deta nonoate 0.025 mM -1.8 N.D. -1.2 +0.0 -2.9
stress McCas_formate_complete hypophosphite 62.5 mM -0.8 N.D. -0.8 +1.1 -5.2
stress McCas_formate_complete sulfate 125 mM -1.7 N.D. -0.9 -0.6 -2.6
stress McCas_formate_complete hypophosphite 62.5 mM -1.1 N.D. -1.5 +0.1 -3.2
stress McCas_formate_complete Antimycin A 0.01 mM -1.0 N.D. -1.4 -0.8 -2.3
stress McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.00833333333333333 mM -2.3 N.D. -2.3 -0.2 -0.7
stress McCas_formate_complete deta nonoate 0.025 mM -1.4 N.D. -1.2 -0.1 -2.9
stress McCas_formate_complete Anhydrotetracycline 0.05 mM -1.4 N.D. -0.7 -1.4 -1.4
stress McCas_formate_complete Polymyxin B sulfate 0.05 mM -1.0 N.D. -1.0 -0.3 -2.3
no stress control McCas_formate_complete no stress control -1.2 N.D. -0.6 -0.2 -2.5
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -2.8 N.D. -0.5 +0.8 -2.0
stress McCas_formate_complete Polymyxin B sulfate 0.05 mM -0.5 N.D. -0.9 -0.3 -2.7
stress McCas_formate_complete Sulfaquinoxaline 0.1 mM -0.6 N.D. -0.5 +0.1 -3.4
no stress control McCas_formate_complete no stress control -0.8 N.D. -0.4 -0.5 -2.7
planktonic H2 pooled triplicate planktonic cells -0.6 N.D. +0.3 -1.8 -2.0
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE -1.8 N.D. -1.4 +0.3 -1.3
iron control, 1x iron with casaminos and vitamins, H2 media -2.2 N.D. -0.5 -0.3 -1.0
stress McCas_formate_complete Irgasan 0.0125 mM -0.8 N.D. -1.0 -0.6 -1.6
no stress control McCas_formate_complete no stress control -1.2 N.D. -0.4 -0.4 -1.8
stress McCas_formate_complete Irgasan 0.0125 mM -1.8 N.D. -1.1 -0.6 -0.4
nitrogen source Formate N-free with 2mM Adenosine -1.4 N.D. -3.5 +1.2 -0.0
stress McCas_formate_complete silver chloride 0.125 mM -1.8 N.D. -0.9 +0.3 -1.3
nitrogen source N2 fixation, H2 media -2.5 N.D. +0.4 -0.1 -1.5
nitrogen source Formate N-free with 2mM Adenosine -2.0 N.D. -2.3 +1.2 -0.5
nitrogen source H2 N-free with 10mM Ammonium chloride -2.2 N.D. -0.7 +0.4 -0.6
nitrogen source Formate N-free with 2mM Adenosine -1.2 N.D. -2.8 +1.8 -0.7
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM -0.2 N.D. -0.9 +0.9 -1.9
nutrient t1 formate McAA B12 dropout -0.3 N.D. -2.6 +0.5 +0.4
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -1.1 N.D. +1.4 -1.1 +0.3
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