Fitness for 5 genes in Methanococcus maripaludis JJ

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500 ntMMJJ_RS07165 and MMJJ_RS07170 are separated by 377 nucleotidesMMJJ_RS07170 and MMJJ_RS07175 are separated by 157 nucleotidesMMJJ_RS07175 and MMJJ_RS07180 are separated by 9 nucleotidesMMJJ_RS07180 and MMJJ_RS07185 are separated by 2 nucleotides MMJJ_RS07165: MMJJ_RS07165 - chromosome segregation protein SMC, at 1,306,768 to 1,310,337 _RS07165 MMJJ_RS07170: MMJJ_RS07170 - pyridoxal phosphate-dependent aminotransferase, at 1,310,715 to 1,312,019 _RS07170 MMJJ_RS07175: MMJJ_RS07175 - DEAD/DEAH box helicase, at 1,312,177 to 1,314,444 _RS07175 MMJJ_RS07180: MMJJ_RS07180 - type I 3-dehydroquinate dehydratase, at 1,314,454 to 1,315,110 _RS07180 MMJJ_RS07185: MMJJ_RS07185 - DUF371 domain-containing protein, at 1,315,113 to 1,315,529 _RS07185
Group Condition MMJJ_RS07165 MMJJ_RS07170 MMJJ_RS07175 MMJJ_RS07180 MMJJ_RS07185
nitrogen source H2 N-free with 10mM D-glucosamine -2.0 -3.0 -1.1 N.D. -0.2
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE -2.0 -3.3 -0.0 N.D. -0.9
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -1.8 -3.4 -0.2 N.D. -0.4
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -2.1 -2.9 -0.4 N.D. -0.1
planktonic H2 pooled triplicate planktonic cells -2.7 -2.2 -0.4 N.D. -0.1
nitrogen source H2 N-free with 10mM Ammonium chloride -1.5 -3.4 -0.4 N.D. -0.0
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -2.7 -2.2 -1.2 N.D. +0.9
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -2.0 -3.2 -0.2 N.D. +0.1
nitrogen source H2 N-free with 10mM D-glucosamine -1.3 -2.8 -1.1 N.D. -0.0
nitrogen source Formate N-free with 2mM Adenosine -2.3 -2.1 -0.5 N.D. -0.4
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -3.0 -2.9 +0.5 N.D. +0.1
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -2.0 -2.5 -0.2 N.D. -0.4
nitrogen source H2 N-free with 10mM Ammonium chloride -1.5 -3.2 -0.1 N.D. -0.2
nitrogen source H2 N-free with 10mM Ammonium chloride -1.7 -3.0 -0.3 N.D. -0.0
biofilm H2 pooled triplicate biofilm cells -2.1 -2.1 -0.6 N.D. -0.1
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE -1.5 -3.3 -0.1 N.D. +0.1
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -1.7 -2.8 +0.6 N.D. -0.3
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -3.0 -2.4 +1.0 N.D. +0.5
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -3.0 -2.5 +1.0 N.D. +0.7
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -1.5 -2.7 +0.8 N.D. -0.1
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -1.5 -2.5 +0.8 N.D. +0.1
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -1.2 -2.7 +0.2 N.D. +0.7
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM -1.0 -1.9 +1.0 N.D. +1.2
stress McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.00833333333333333 mM -2.2 -0.3 +0.8 N.D. +1.7
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM -1.0 -1.3 +1.2 N.D. +1.6
stress McCas_formate_complete sodium bromide 125 mM -1.1 -0.8 +1.0 N.D. +2.1
stress McCas_formate_complete Irgasan 0.0125 mM -1.5 +1.2 +0.9 N.D. +1.7
stress McCas_formate_complete 3-nitroxypropanol 0.00208333333333333 mM -1.1 +1.1 +0.8 N.D. +1.9
stress McCas_formate_complete Rifampicin 0.25 mM -0.8 +2.0 +1.1 N.D. +0.9
stress McCas_formate_complete Fluorophosphate 31.25 mM -0.5 +0.9 +1.2 N.D. +2.2
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