Fitness for 5 genes in Methanococcus maripaludis JJ

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500 ntMMJJ_RS07160 and MMJJ_RS07165 are separated by 34 nucleotidesMMJJ_RS07165 and MMJJ_RS07170 are separated by 377 nucleotidesMMJJ_RS07170 and MMJJ_RS07175 are separated by 157 nucleotidesMMJJ_RS07175 and MMJJ_RS07180 are separated by 9 nucleotides MMJJ_RS07160: MMJJ_RS07160 - M20 family metallo-hydrolase, at 1,305,486 to 1,306,733 _RS07160 MMJJ_RS07165: MMJJ_RS07165 - chromosome segregation protein SMC, at 1,306,768 to 1,310,337 _RS07165 MMJJ_RS07170: MMJJ_RS07170 - pyridoxal phosphate-dependent aminotransferase, at 1,310,715 to 1,312,019 _RS07170 MMJJ_RS07175: MMJJ_RS07175 - DEAD/DEAH box helicase, at 1,312,177 to 1,314,444 _RS07175 MMJJ_RS07180: MMJJ_RS07180 - type I 3-dehydroquinate dehydratase, at 1,314,454 to 1,315,110 _RS07180
Group Condition MMJJ_RS07160 MMJJ_RS07165 MMJJ_RS07170 MMJJ_RS07175 MMJJ_RS07180
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -4.9 -2.7 -2.2 -1.2 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -4.5 -1.8 -3.4 -0.2 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -4.5 -2.0 -3.2 -0.2 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -4.8 -1.5 -3.1 -0.1 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -3.8 -2.1 -2.9 -0.4 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -4.5 -2.0 -2.5 -0.2 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -4.8 -1.6 -2.6 -0.0 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -3.6 -1.8 -2.8 +0.0 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -2.6 -3.0 -2.9 +0.5 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE -2.7 -2.0 -3.3 -0.0 N.D.
nitrogen source Formate N-free with 2mM Adenosine -2.9 -2.3 -2.1 -0.5 N.D.
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -4.0 -1.8 -1.9 -0.0 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -4.2 -1.2 -2.1 -0.1 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE -2.7 -1.5 -3.3 -0.1 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -3.6 -1.2 -2.7 +0.2 N.D.
iron Iron excess (2.5x) , H2 media -2.6 -2.0 -2.0 -0.6 N.D.
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -4.0 -1.5 -1.4 -0.1 N.D.
nitrogen source H2 N-free with 10mM Ammonium chloride -1.6 -1.5 -3.4 -0.4 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -2.3 -3.0 -2.4 +1.0 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -2.3 -3.0 -2.5 +1.0 N.D.
nitrogen source Formate N-free with 2mM Adenosine -2.5 -2.0 -1.5 -0.7 N.D.
nitrogen source H2 N-free with 10mM Ammonium chloride -1.8 -1.7 -3.0 -0.3 N.D.
iron Iron excess (2.5x) , H2 media -2.7 -2.0 -1.4 -0.5 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -2.5 -1.8 -2.1 -0.1 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -2.1 -1.9 -2.5 +0.1 N.D.
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -3.8 -1.5 -0.9 -0.2 N.D.
nitrogen source H2 N-free with 10mM Ammonium chloride -1.5 -1.5 -3.2 -0.1 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -2.1 -1.7 -2.8 +0.6 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -2.4 -1.5 -2.5 +0.8 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -2.1 -1.5 -2.7 +0.8 N.D.
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