Fitness for 5 genes in Methanococcus maripaludis JJ

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500 ntMMJJ_RS06755 and MMJJ_RS06760 are separated by 15 nucleotidesMMJJ_RS06760 and MMJJ_RS06765 are separated by 116 nucleotidesMMJJ_RS06765 and MMJJ_RS06770 are separated by 116 nucleotidesMMJJ_RS06770 and MMJJ_RS06775 are separated by 36 nucleotides MMJJ_RS06755: MMJJ_RS06755 - diadenylate cyclase, at 1,247,098 to 1,248,036 _RS06755 MMJJ_RS06760: MMJJ_RS06760 - Ni-sirohydrochlorin a,c-diamide synthase, at 1,248,052 to 1,249,395 _RS06760 MMJJ_RS06765: MMJJ_RS06765 - hypothetical protein, at 1,249,512 to 1,250,249 _RS06765 MMJJ_RS06770: MMJJ_RS06770 - hypothetical protein, at 1,250,366 to 1,251,199 _RS06770 MMJJ_RS06775: MMJJ_RS06775 - isoleucine--tRNA ligase, at 1,251,236 to 1,254,340 _RS06775
Group Condition MMJJ_RS06755 MMJJ_RS06760 MMJJ_RS06765 MMJJ_RS06770 MMJJ_RS06775
stress McCas_formate_complete Spiramycin 0.1 mM -2.7 -2.9 +0.1 +0.3 N.D.
stress McCas_formate_complete sulfate 125 mM -2.4 -2.5 -0.2 +0.4 N.D.
stress McCas_formate_complete Nitrofurantoin 0.025 mM -1.8 -2.4 -0.3 -0.1 N.D.
stress McCas_formate_complete selenate 31.25 mM -1.8 -2.5 -0.2 +0.1 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -1.3 -2.6 -0.2 +0.3 N.D.
stress McCas_formate_complete Polymyxin B sulfate 0.05 mM -2.4 -1.7 -0.1 +0.4 N.D.
nitrogen source Formate N-free with 2mM Adenosine -3.2 -1.5 +0.6 +0.6 N.D.
stress McCas_formate_complete Spiramycin 0.1 mM -2.3 -1.6 +0.2 +0.3 N.D.
stress McCas_formate_complete Anhydrotetracycline 0.05 mM -2.1 -1.8 -0.0 +0.5 N.D.
nitrogen source H2 N-free with 10mM D-glucosamine -1.0 -2.8 +0.4 +0.4 N.D.
nutrient t1 formate vitamin complete -1.1 -2.6 +0.3 +0.4 N.D.
iron Iron excess (2.5x) , H2 media -0.1 -3.9 +0.6 +0.4 N.D.
nitrogen source H2 N-free with 10mM Ammonium chloride -0.5 -3.2 +0.6 +0.4 N.D.
nitrogen source H2 N-free with 10mM Ammonium chloride -0.8 -2.9 +0.5 +0.3 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE +0.0 -3.7 +0.4 +0.5 N.D.
stress McCas_formate_complete hypophosphite 62.5 mM -2.0 -1.6 +0.5 +0.5 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE +0.5 -3.6 +0.4 +0.4 N.D.
iron Iron limitation (0.2x), H2 media +0.2 -3.4 +0.4 +0.4 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -0.3 -3.1 +0.6 +0.7 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 +0.6 -3.5 +0.4 +0.4 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE +0.5 -3.7 +0.6 +0.6 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE +0.5 -3.4 +0.5 +0.5 N.D.
iron control, 1x iron with casaminos and vitamins, H2 media +0.2 -3.2 +0.7 +0.5 N.D.
nitrogen source Formate N-free with 2mM Adenosine -2.7 -0.3 +0.9 +0.7 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 +0.7 -2.8 +0.4 +0.5 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE +0.8 -2.9 +0.3 +0.5 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE +0.8 -2.8 +0.4 +0.4 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 +0.9 -2.9 +0.4 +0.6 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE +0.8 -2.7 +0.7 +0.8 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE +1.8 -2.2 +0.1 +0.5 N.D.
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